orange1.1g018558m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g018558m.g T143263_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018558m C2H2 ZF 14 37
orange1.1g018558m C2H2 ZF 43 63

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10015764m.g Citrus clementina Ciclev10015764m.g N 0.827
GLYMA19G11090 Glycine max GLYMA19G11090 N 0.792
AT3G27970 Arabidopsis thaliana AT3G27970 N 0.776
Bo2g146110 Brassica oleracea Bo2g146110 N 0.775
MDP0000196563 Malus domestica MDP0000196563 N 0.774
Pm015710 Prunus mume Pm015710 N 0.772
PRUPE_ppa008078mg Prunus persica PRUPE_ppa008078mg N 0.772
Gorai.007G340600 Gossypium raimondii Gorai.007G340600 N 0.767
Lus10022230.g Linum usitatissimum Lus10022230.g N 0.762
cassava27353.m1 Manihot esculenta cassava27353.m1 N 0.762
evm.TU.supercontig_39.83 Carica papaya evm.TU.supercontig_39.83 N 0.762
Lus10008787.g Linum usitatissimum Lus10008787.g N 0.762