orange1.1g046329m.g (Citrus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 orange1.1g046329m.g T143294_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g046329m C2H2 ZF 202 223
orange1.1g046329m C2H2 ZF 223 248

Links

Other C2H2 ZF family TFs
Other Citrus sinensis TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.827
MDP0000899280 Malus domestica MDP0000899280 N 0.818
MDP0000303483 Malus domestica MDP0000303483 N 0.818
Ca_24699 Cicer arietinum Ca_24699 N 0.818
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.818
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.818
Pm029018 Prunus mume Pm029018 N 0.818
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.818
TCM_011858 Theobroma cacao TCM_011858 N 0.818
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.818
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.818
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.818
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.818
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.818
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.803
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.797
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.797
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.797
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.794
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.794
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.794
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.794
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.794
Ca_08435 Cicer arietinum Ca_08435 N 0.794
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.794
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.794
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.794
Cla002714 Citrullus lanatus Cla002714 N 0.794
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.794
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.794
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.793
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.793
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.793
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.791
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.791
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.791
Si030360m.g Setaria italica Si030360m.g N 0.791
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.791
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.791
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.791
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.791
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.791
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.791
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.791
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.791
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.791
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.791
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.791
OS09G0307400 Oryza sativa OS09G0307400 N 0.791
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.791
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.788
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.788
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.788
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.788
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.788
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.788
WIP6 Arabidopsis thaliana AT1G13290 N 0.788
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.788
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.788
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.788
Bo5g015200 Brassica oleracea Bo5g015200 N 0.788
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.788
TCM_040610 Theobroma cacao TCM_040610 N 0.788
Bra019822 Brassica rapa Bra019822 N 0.788
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.788
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.788
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.788
SapurV1A.1001s0040 Salix purpurea SapurV1A.1001s0040 N 0.788
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.788
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.788
Ca_21713 Cicer arietinum Ca_21713 N 0.788
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.788
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.788
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.788
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.788
OBART06G20890 Oryza barthii OBART06G20890 N 0.788
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.787
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.787
30169.m006417 Ricinus communis 30169.m006417 N 0.787
27810.m000651 Ricinus communis 27810.m000651 N 0.784
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.784
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.784
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.784
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.784
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.784
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.784
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.784
TCM_024788 Theobroma cacao TCM_024788 N 0.784
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.784
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.784
NTT Vitis vinifera VIT_08s0007g08070 N 0.784
Ca_07269 Cicer arietinum Ca_07269 N 0.784
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.784
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.784
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.784
Pm025853 Prunus mume Pm025853 N 0.784
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.784
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.784
Cla008187 Citrullus lanatus Cla008187 N 0.784
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.784
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.784
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.784
PK03705.1 Cannabis sativa PK03705.1 N 0.784
Bo4g111000 Brassica oleracea Bo4g111000 N 0.784
WIP2 Arabidopsis thaliana AT3G57670 N 0.784
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.784
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.784
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.784
MDP0000601705 Malus domestica MDP0000601705 N 0.784
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.784
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.784
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.784
Bra014612 Brassica rapa Bra014612 N 0.784
Bra003295 Brassica rapa Bra003295 N 0.784
Bo8g092070 Brassica oleracea Bo8g092070 N 0.784
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.784
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.784
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.784
Bo6g073120 Brassica oleracea Bo6g073120 N 0.784
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.784
Bra007346 Brassica rapa Bra007346 N 0.782
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.782
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.780
MDP0000580545 Malus domestica MDP0000580545 N 0.778
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.778
Cla008675 Citrullus lanatus Cla008675 N 0.778
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.778
MDP0000403797 Malus domestica MDP0000403797 N 0.778
mgf019910m Mimulus guttatus mgf019910m N 0.778
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.778
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.778
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.778
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.778
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.778
Pm000471 Prunus mume Pm000471 N 0.778
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.778
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.777
GSMUA_Achr5G26210_001 Musa acuminata GSMUA_Achr5G26210_001 N 0.777
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.774
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.774
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.774
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.774
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.774
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.774
OBART09G03640 Oryza barthii OBART09G03640 N 0.774
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.774
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.774
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.774
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.774
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.774
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.767
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.767
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.767
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.767
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.767
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.767
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.767
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.767
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.767
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.767
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.767
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.767
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.767
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.767
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.767
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.767
TCM_041441 Theobroma cacao TCM_041441 N 0.767
MDP0000131949 Malus domestica MDP0000131949 N 0.767
30055.m001542 Ricinus communis 30055.m001542 N 0.767
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.767
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.767
Pm001374 Prunus mume Pm001374 N 0.767
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.767
MDP0000300013 Malus domestica MDP0000300013 N 0.767
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.767
Ca_07051 Cicer arietinum Ca_07051 N 0.767
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.767
Pavir.J11927 Panicum virgatum Pavir.J11927 N 0.766
Sb09g021850 Sorghum bicolor Sb09g021850 N 0.766
Si022296m.g Setaria italica Si022296m.g N 0.766
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.764
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.764
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.764
Si006616m.g Setaria italica Si006616m.g N 0.764
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.764
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.764
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.764
OB06G28740 Oryza brachyantha OB06G28740 N 0.764
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.764
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.764
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.764
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.764
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.764
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.764
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.764
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.764
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.764
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.764
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.764
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.764
OS06G0612300 Oryza sativa OS06G0612300 N 0.764
Ca_16482 Cicer arietinum Ca_16482 N 0.762
PK05257.1 Cannabis sativa PK05257.1 N 0.761
OBART02G07320 Oryza barthii OBART02G07320 N 0.761
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.761
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.761
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.758
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.758
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.758
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.758
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.758
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.758
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.758
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.758
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.758
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.758
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.758
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.758
OS08G0504000 Oryza sativa OS08G0504000 N 0.758
OS09G0485600 Oryza sativa OS09G0485600 N 0.758
Si013819m.g Setaria italica Si013819m.g N 0.758
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.758
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.758
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.758
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.758
OBART08G19670 Oryza barthii OBART08G19670 N 0.758
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.758
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.758
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.758
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.758
OB08G26650 Oryza brachyantha OB08G26650 N 0.758