Pavir.Ab03315 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ab03315 T143308_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RBE
M01858_2.00
Arabidopsis thaliana
NNNASWN

NWSTNNN
PBM
Weirauch et al.(2014)
pTH7538
0.766 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ab03315.1.p C2H2 ZF 48 70

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action