Pavir.Ib02022 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ib02022 T143392_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib02022.1.p C2H2 ZF 47 69

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G105092 Zea mays GRMZM2G105092 N 0.827
Traes_2AS_1913BF8B3 Triticum aestivum Traes_2AS_1913BF8B3 N 0.827
Pavir.J38099 Panicum virgatum Pavir.J38099 N 0.827
PDK_20s1337431g001 Phoenix dactylifera PDK_20s1337431g001 N 0.802
OS07G0590100 Oryza sativa OS07G0590100 N 0.756
ORUFI07G21520 Oryza rufipogon ORUFI07G21520 N 0.756
OPUNC07G19500 Oryza punctata OPUNC07G19500 N 0.756
OBART07G20660 Oryza barthii OBART07G20660 N 0.756
OGLUM07G20440 Oryza glumaepatula OGLUM07G20440 N 0.756
OMERI07G17320 Oryza meridionalis OMERI07G17320 N 0.756
ONIVA07G19100 Oryza nivara ONIVA07G19100 N 0.756
ORGLA07G0158200 Oryza glaberrima ORGLA07G0158200 N 0.756