Pavir.J32778 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J32778 T143428_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J32778.1.p C2H2 ZF 202 225
Pavir.J32778.1.p C2H2 ZF 233 256

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA006205 Oryza indica BGIOSGA006205 N 0.827
OPUNC02G19290 Oryza punctata OPUNC02G19290 N 0.827
ONIVA02G23610 Oryza nivara ONIVA02G23610 N 0.827
ORUFI02G22530 Oryza rufipogon ORUFI02G22530 N 0.827
OS02G0572900 Oryza sativa OS02G0572900 N 0.827
Pavir.J13034 Panicum virgatum Pavir.J13034 N 0.827
Si017455m.g Setaria italica Si017455m.g N 0.827
Sb04g023670 Sorghum bicolor Sb04g023670 N 0.827
OMERI02G21010 Oryza meridionalis OMERI02G21010 N 0.827
ORGLA02G0184700 Oryza glaberrima ORGLA02G0184700 N 0.827
MLOC_19108 Hordeum vulgare MLOC_19108 N 0.827
OLONG_009376 Oryza longistaminata OLONG_009376 N 0.827
OB02G28900 Oryza brachyantha OB02G28900 N 0.827
GRMZM2G023988 Zea mays GRMZM2G023988 N 0.827
OGLUM02G21630 Oryza glumaepatula OGLUM02G21630 N 0.827
OBART02G21440 Oryza barthii OBART02G21440 N 0.827
LPERR02G17380 Leersia perrieri LPERR02G17380 N 0.803
VIT_07s0141g00020 Vitis vinifera VIT_07s0141g00020 N 0.778
Eucgr.C01586 Eucalyptus grandis Eucgr.C01586 N 0.759
Solyc04g056320.1 Solanum lycopersicum Solyc04g056320.1 N 0.759
PGSC0003DMG400003459 Solanum tuberosum PGSC0003DMG400003459 N 0.759
Eucgr.C01587 Eucalyptus grandis Eucgr.C01587 N 0.759
F775_30558 Aegilops tauschii F775_30558 N 0.758
Traes_6AL_393A90DDD Triticum aestivum Traes_6AL_393A90DDD N 0.758
Traes_6DL_3B9E63F04 Triticum aestivum Traes_6DL_3B9E63F04 N 0.758