SapurV1A.0015s0850 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0015s0850 T143444_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.788 0.953
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.788 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0015s0850.1.p C2H2 ZF 135 156
SapurV1A.0015s0850.1.p C2H2 ZF 155 181

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SGR5 Arabidopsis thaliana AT2G01940 D 0.788
TCM_011210 Theobroma cacao TCM_011210 I 0.803
Cucsa.122150 Cucumis sativus Cucsa.122150 I 0.794
mgf008235m Mimulus guttatus mgf008235m I 0.797
Aquca_002_01252 Aquilegia coerulea Aquca_002_01252 I 0.803
Bostr.0556s0022 Boechera stricta Bostr.0556s0022 I 0.788
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I 0.788
Bostr.26959s0085 Boechera stricta Bostr.26959s0085 I 0.811
Cagra.1111s0006 Capsella grandiflora Cagra.1111s0006 I 0.811
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I 0.788
Cagra.3834s0006 Capsella grandiflora Cagra.3834s0006 I 0.788
Carubv10009424m.g Capsella rubella Carubv10009424m.g I 0.788
Carubv10017254m.g Capsella rubella Carubv10017254m.g I 0.788
Carubv10020337m.g Capsella rubella Carubv10020337m.g I 0.811
Ciclev10015315m.g Citrus clementina Ciclev10015315m.g I 0.798
Cucsa.112090 Cucumis sativus Cucsa.112090 I 0.803
cassava36596.valid.m1 Manihot esculenta cassava36596.valid.m1 I 0.794
TCM_039880 Theobroma cacao TCM_039880 I 0.794
Traes_4AS_2718699A7 Triticum aestivum Traes_4AS_2718699A7 I 0.792
VIT_01s0011g06400 Vitis vinifera VIT_01s0011g06400 I 0.803
VIT_17s0000g01870 Vitis vinifera VIT_17s0000g01870 I 0.803
Ca_05083 Cicer arietinum Ca_05083 I 0.798
Ca_22171 Cicer arietinum Ca_22171 I 0.797
Cla005913 Citrullus lanatus Cla005913 I 0.759
Cla018945 Citrullus lanatus Cla018945 I 0.803
Pm005926 Prunus mume Pm005926 I 0.788
Pm025274 Prunus mume Pm025274 I 0.798
28952.m000016 Ricinus communis 28952.m000016 I 0.803
cassava18079.valid.m1 Manihot esculenta cassava18079.valid.m1 I 0.803
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I 0.794
Ciclev10020125m.g Citrus clementina Ciclev10020125m.g I 0.803
Eucgr.G02066 Eucalyptus grandis Eucgr.G02066 I 0.788
Lus10031314.g Linum usitatissimum Lus10031314.g I 0.798
Lus10031882.g Linum usitatissimum Lus10031882.g I 0.798
orange1.1g014184m.g Citrus sinensis orange1.1g014184m.g I 0.798
orange1.1g037502m.g Citrus sinensis orange1.1g037502m.g I 0.803
Pavir.J12350 Panicum virgatum Pavir.J12350 I 0.792
SapurV1A.0055s0020 Salix purpurea SapurV1A.0055s0020 I 0.803
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I 0.794
SapurV1A.1169s0070 Salix purpurea SapurV1A.1169s0070 I 0.803
Thhalv10004221m.g Eutrema salsugineum Thhalv10004221m.g I 0.788
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I 0.788
Thhalv10018614m.g Eutrema salsugineum Thhalv10018614m.g I 0.811
PK17145.1 Cannabis sativa PK17145.1 I 0.762
PK25720.1 Cannabis sativa PK25720.1 I 0.788
Lus10026369.g Linum usitatissimum Lus10026369.g I 0.788
Gorai.009G329200 Gossypium raimondii Gorai.009G329200 I 0.788
Eucgr.H00574 Eucalyptus grandis Eucgr.H00574 I 0.788
Eucgr.K02292 Eucalyptus grandis Eucgr.K02292 I 0.788
evm.TU.supercontig_2.118 Carica papaya evm.TU.supercontig_2.118 I 0.794
evm.TU.supercontig_7.131 Carica papaya evm.TU.supercontig_7.131 I 0.798
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I 0.788
gene09325-v1.0-hybrid Fragaria vesca gene09325-v1.0-hybrid I 0.803
Gorai.002G171100 Gossypium raimondii Gorai.002G171100 I 0.803
Gorai.005G134600 Gossypium raimondii Gorai.005G134600 I 0.788
Gorai.005G154300 Gossypium raimondii Gorai.005G154300 I 0.765
Gorai.006G190500 Gossypium raimondii Gorai.006G190500 I 0.788
Gorai.007G002600 Gossypium raimondii Gorai.007G002600 I 0.788
Gorai.008G169500 Gossypium raimondii Gorai.008G169500 I 0.779
Gorai.008G293000 Gossypium raimondii Gorai.008G293000 I 0.803
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I 0.788
Solyc06g072360.2 Solanum lycopersicum Solyc06g072360.2 I 0.803
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I 0.788
Bra026624 Brassica rapa Bra026624 I 0.788
BRADI1G68730 Brachypodium distachyon BRADI1G68730 I 0.792
F775_43255 Aegilops tauschii F775_43255 I 0.792
AtIDD14 Arabidopsis lyrata fgenesh2_kg.2__1036__AT1G68130.1 I 0.811
SGR5 Arabidopsis lyrata fgenesh2_kg.5__108__AT2G01940.1 I 0.788
GLYMA05G26780 Glycine max GLYMA05G26780 I 0.798
GLYMA05G33590 Glycine max GLYMA05G33590 I 0.797
GLYMA07G12170 Glycine max GLYMA07G12170 I 0.797
GLYMA08G06130 Glycine max GLYMA08G06130 I 0.797
GLYMA08G09760 Glycine max GLYMA08G09760 I 0.798
GLYMA09G30030 Glycine max GLYMA09G30030 I 0.797
GRMZM2G074032 Zea mays GRMZM2G074032 I 0.792
GRMZM2G465595 Zea mays GRMZM2G465595 I 0.792
Bra024841 Brassica rapa Bra024841 I 0.794
Bra024771 Brassica rapa Bra024771 I 0.782
AtIDD16 Arabidopsis thaliana AT1G25250 I 0.788
IDD14 Arabidopsis thaliana AT1G68130 I 0.811
BGIOSGA011151 Oryza indica BGIOSGA011151 I 0.792
Bo2g134790 Brassica oleracea Bo2g134790 I 0.788
Bo3g139880 Brassica oleracea Bo3g139880 I 0.788
Bo5g043540 Brassica oleracea Bo5g043540 I 0.782
Bo6g097320 Brassica oleracea Bo6g097320 I 0.811
Bo6g106560 Brassica oleracea Bo6g106560 I 0.811
Bo9g070370 Brassica oleracea Bo9g070370 I 0.788
Bra004050 Brassica rapa Bra004050 I 0.811
Bra004283 Brassica rapa Bra004283 I 0.811
Bra010981 Brassica rapa Bra010981 I 0.788
Bra017432 Brassica rapa Bra017432 I 0.788
GSMUA_Achr10G29940_001 Musa acuminata GSMUA_Achr10G29940_001 I 0.779
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I 0.788
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I 0.782
ORGLA08G0153600 Oryza glaberrima ORGLA08G0153600 I 0.762
ORGLA09G0169200 Oryza glaberrima ORGLA09G0169200 I 0.762
ORUFI03G10000 Oryza rufipogon ORUFI03G10000 I 0.792
OS03G0237250 Oryza sativa OS03G0237250 I 0.792
OS08G0467100 Oryza sativa OS08G0467100 I 0.762
PGSC0003DMG400026959 Solanum tuberosum PGSC0003DMG400026959 I 0.794
PGSC0003DMG400031049 Solanum tuberosum PGSC0003DMG400031049 I 0.803
POPTR_0008s13980 Populus trichocarpa POPTR_0008s13980 I 0.803
POPTR_0010s11160 Populus trichocarpa POPTR_0010s11160 I 0.803
POPTR_0012s03730 Populus trichocarpa POPTR_0012s03730 I 0.803
POPTR_0015s05180 Populus trichocarpa POPTR_0015s05180 I 0.794
PRUPE_ppa004447mg Prunus persica PRUPE_ppa004447mg I 0.798
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I 0.788
ORGLA03G0094200 Oryza glaberrima ORGLA03G0094200 I 0.792
OPUNC08G15410 Oryza punctata OPUNC08G15410 I 0.762
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I 0.788
LPERR03G08760 Leersia perrieri LPERR03G08760 I 0.792
LPERR08G14510 Leersia perrieri LPERR08G14510 I 0.762
OB09G18760 Oryza brachyantha OB09G18760 I 0.782
OBART08G17550 Oryza barthii OBART08G17550 I 0.762
OGLUM03G09920 Oryza glumaepatula OGLUM03G09920 I 0.792
OGLUM08G18370 Oryza glumaepatula OGLUM08G18370 I 0.762
OMERI03G09110 Oryza meridionalis OMERI03G09110 I 0.792
OMERI08G14120 Oryza meridionalis OMERI08G14120 I 0.762
ONIVA03G10380 Oryza nivara ONIVA03G10380 I 0.792
ONIVA08G19430 Oryza nivara ONIVA08G19430 I 0.762
OPUNC03G09440 Oryza punctata OPUNC03G09440 I 0.792
Solyc01g005060.2 Solanum lycopersicum Solyc01g005060.2 I 0.812
estExt_Genewise1.C_2180024 Physcomitrella patens estExt_Genewise1.C_2180024 N 0.759