SapurV1A.0444s0180 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0444s0180 T143488_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
id1
M02672_2.00 		Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA		 SELEX
Mathelier et al.(2014)
MA0120.1 		0.757 0.763
id1
M10380_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ID1_01 		0.757 0.763
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0444s0180.1.p C2H2 ZF 145 166
SapurV1A.0444s0180.1.p C2H2 ZF 167 188
SapurV1A.0444s0180.2.p C2H2 ZF 82 103
SapurV1A.0444s0180.2.p C2H2 ZF 104 125

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_008261 Theobroma cacao TCM_008261 I 0.788
POPTR_0327s00220 Populus trichocarpa POPTR_0327s00220 I 0.788
VIT_09s0054g01820 Vitis vinifera VIT_09s0054g01820 I 0.788
cassava21529.m1 Manihot esculenta cassava21529.m1 I 0.788
POPTR_0001s12770 Populus trichocarpa POPTR_0001s12770 I 0.788
Gorai.005G198100 Gossypium raimondii Gorai.005G198100 I 0.788
Eucgr.B03566 Eucalyptus grandis Eucgr.B03566 I 0.782
Si036003m.g Setaria italica Si036003m.g I 0.781
Sb01g021480 Sorghum bicolor Sb01g021480 I 0.781
Bostr.2983s0191 Boechera stricta Bostr.2983s0191 I 0.774
PK25985.1 Cannabis sativa PK25985.1 I 0.774
Cagra.0635s0013 Capsella grandiflora Cagra.0635s0013 I 0.774
Carubv10001008m.g Capsella rubella Carubv10001008m.g I 0.774
AtIDD12 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6003159 I 0.774
PGSC0003DMG400003372 Solanum tuberosum PGSC0003DMG400003372 I 0.774
Solyc06g075250.2 Solanum lycopersicum Solyc06g075250.2 I 0.774
GLYMA12G29370 Glycine max GLYMA12G29370 I 0.769
Traes_4BL_38E55D7B4 Triticum aestivum Traes_4BL_38E55D7B4 I 0.768
GLYMA11G15950 Glycine max GLYMA11G15950 I 0.768
30128.m008580 Ricinus communis 30128.m008580 I 0.768
ONIVA02G20290 Oryza nivara ONIVA02G20290 I 0.762
OMERI02G18510 Oryza meridionalis OMERI02G18510 I 0.762
TRIUR3_32694 Triticum urartu TRIUR3_32694 I 0.762
OLONG_013811 Oryza longistaminata OLONG_013811 I 0.762
Pavir.Ab01787 Panicum virgatum Pavir.Ab01787 I 0.762
BRADI3G44520 Brachypodium distachyon BRADI3G44520 I 0.762
Pavir.Aa01904 Panicum virgatum Pavir.Aa01904 I 0.762
F775_04344 Aegilops tauschii F775_04344 I 0.762
OGLUM02G18620 Oryza glumaepatula OGLUM02G18620 I 0.762
ORUFI02G19290 Oryza rufipogon ORUFI02G19290 I 0.762
Traes_4DL_DF1F43E16 Triticum aestivum Traes_4DL_DF1F43E16 I 0.762
LPERR02G14730 Leersia perrieri LPERR02G14730 I 0.762
OB02G26130 Oryza brachyantha OB02G26130 I 0.762
ORGLA02G0157900 Oryza glaberrima ORGLA02G0157900 I 0.762
OS02G0518500 Oryza sativa OS02G0518500 I 0.762
Traes_4AS_F7A905B43 Triticum aestivum Traes_4AS_F7A905B43 I 0.762
BGIOSGA006371 Oryza indica BGIOSGA006371 I 0.762
GRMZM2G320287 Zea mays GRMZM2G320287 I 0.762
OPUNC02G16560 Oryza punctata OPUNC02G16560 I 0.762
Sb04g021440 Sorghum bicolor Sb04g021440 I 0.762
Si019690m.g Setaria italica Si019690m.g I 0.762
OBART02G18320 Oryza barthii OBART02G18320 I 0.762
SapurV1A.0376s0110 Salix purpurea SapurV1A.0376s0110 I 0.760
POPTR_0005s23660 Populus trichocarpa POPTR_0005s23660 I 0.760
Eucgr.B01471 Eucalyptus grandis Eucgr.B01471 I 0.760
id1 Zea mays GRMZM2G011357 D 0.757