CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0444s0180
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.0444s0180
T143488_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
id1
M02672_2.00
Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA
SELEX
Mathelier et al.(2014)
MA0120.1
0.757
0.763
id1
M10380_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ID1_01
0.757
0.763
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0444s0180.1.p
C2H2 ZF
145
166
WRCEKCSKRYAVQSDWKAHTKI
SapurV1A.0444s0180.1.p
C2H2 ZF
167
188
CGTREYRCDCGTSFSRKDSFVT
SapurV1A.0444s0180.2.p
C2H2 ZF
82
103
WRCEKCSKRYAVQSDWKAHTKI
SapurV1A.0444s0180.2.p
C2H2 ZF
104
125
CGTREYRCDCGTSFSRKDSFVT
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy