SapurV1A.0444s0180 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.0444s0180 T143488_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
id1
M02672_2.00 		Zea mays
TBKYYBYTHBYG
CRVDARVRRMVA		 SELEX
Mathelier et al.(2014)
MA0120.1 		0.757 0.763
id1
M10380_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ID1_01 		0.757 0.763
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0444s0180.1.p C2H2 ZF 145 166
SapurV1A.0444s0180.1.p C2H2 ZF 167 188
SapurV1A.0444s0180.2.p C2H2 ZF 82 103
SapurV1A.0444s0180.2.p C2H2 ZF 104 125

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action