CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10005323m.g
(
Eutrema salsugineum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Thhalv10005323m.g
T143532_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10005323m
C2H2 ZF
207
229
YKCDTCGKVLRSYQALGGHRTSH
Thhalv10005323m
C2H2 ZF
256
278
YKCDICDRVFESGQALGGHKKVH
Links
Other
C2H2 ZF
family TFs
Other
Eutrema salsugineum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra012953
Brassica rapa
Bra012953
N
0.792
Bo7g098740
Brassica oleracea
Bo7g098740
N
0.792
POPTR_0001s00800
Populus trichocarpa
POPTR_0001s00800
I
0.787
30147.m014242
Ricinus communis
30147.m014242
I
0.787
SapurV1A.1544s0070
Salix purpurea
SapurV1A.1544s0070
I
0.786
SapurV1A.1944s0060
Salix purpurea
SapurV1A.1944s0060
I
0.786
cassava21316.m1
Manihot esculenta
cassava21316.m1
I
0.786
Cla001400
Citrullus lanatus
Cla001400
I
0.782
Bra012914
Brassica rapa
Bra012914
I
0.777
Bra029985
Brassica rapa
Bra029985
I
0.777
Bo1g081350
Brassica oleracea
Bo1g081350
I
0.777
Thhalv10010909m.g
Eutrema salsugineum
Thhalv10010909m.g
I
0.777
Ciclev10007101m.g
Citrus clementina
Ciclev10007101m.g
I
0.777
Bra018817
Brassica rapa
Bra018817
I
0.771
Bostr.26833s0090
Boechera stricta
Bostr.26833s0090
N
0.768
Bostr.26675s0176
Boechera stricta
Bostr.26675s0176
I
0.766
cassava32957.m1
Manihot esculenta
cassava32957.m1
I
0.766
Gorai.005G232300
Gossypium raimondii
Gorai.005G232300
I
0.765
AT5G61470
Arabidopsis thaliana
AT5G61470
N
0.765
cassava47027.m1
Manihot esculenta
cassava47027.m1
N
0.762
Lus10038929.g
Linum usitatissimum
Lus10038929.g
N
0.762