CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10006508m.g
(
Eutrema salsugineum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Thhalv10006508m.g
T143537_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH
DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.803
0.978
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN
NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.803
0.913
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN
NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.802
0.870
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN
NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.775
0.717
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10006508m
C2H2 ZF
202
224
YTCETCGKVFKSYQALGGHRASH
Thhalv10006508m
C2H2 ZF
255
277
HECPICLRVFASGQALGGHKRSH
Links
Other
C2H2 ZF
family TFs
Other
Eutrema salsugineum
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_003790
Aspergillus clavatus
CADACLAG00000098
I
0.000
BBA_08203
Beauveria bassiana
BBA_08203
I
0.000
BBA_09836
Beauveria bassiana
BBA_09836
I
0.000
CaO19.1227
Candida albicans
CaO19.1227
I
0.000
CaO19.8813
Candida albicans
CaO19.8813
I
0.000
CCM_00925
Cordyceps militaris
CCM_00925
I
0.000
CD36_07140
Candida dubliniensis
CD36_07140
I
0.000
CHGG_08641
Chaetomium globosum
CHGG_08641
I
0.000
CTHT_0045110
Chaetomium thermophilum
CTHT_0045110
I
0.000
estExt_fgenesh1_pg.C_60724
Cryphonectria parasitica
estExt_fgenesh1_pg.C_60724
I
0.000
ff-7
Neurospora crassa
NCU04001
D
0.000
FFUJ_07470
Fusarium fujikuroi
FFUJ_07470
I
0.000
FGRRES_10069
Fusarium graminearum
FGRRES_10069
I
0.000
FPSE_00487
Fusarium pseudograminearum
FPSE_00487
I
0.000
FVEG_02704
Fusarium verticillioides
FVEG_02704
I
0.000
GGTG_06963
Gaeumannomyces graminis
GGTG_06963
I
0.000
MAC_03890
Metarhizium acridum
MAC_03890
I
0.000
MAJ_05190
Metarhizium majus
MAJ_05190
I
0.000
MAM_05054
Metarhizium album
MAM_05054
I
0.000
MANI_012280
Metarhizium anisopliae
MANI_012280
I
0.000
MBR_04325
Metarhizium brunneum
MBR_04325
I
0.000
MGG_08093
Magnaporthe oryzae
MGG_08093
I
0.000
MGU_05613
Metarhizium guizhouense
MGU_05613
I
0.000
MYCTH_2307450
Myceliophthora thermophila
MYCTH_2307450
I
0.000
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
0.000
PFICI_06028
Pestalotiopsis fici
PFICI_06028
I
0.000
PFL1_05822
Pseudozyma flocculosa
PFL1_05822
I
0.000
PODANS_4_2530
Podospora anserina
PODANS_4_2530
I
0.000
PV07_00139
Cladophialophora immunda
PV07_00139
I
0.000
PV10_02783
Exophiala mesophila
PV10_02783
I
0.000
PV11_06966
Exophiala sideris
PV11_06966
I
0.000
S40285_01325
Stachybotrys chlorohalonata
S40285_01325
I
0.000
SAKL0D14916g
Lachancea kluyveri
SAKL0D14916g
I
0.000
scaffold_6-snap.550.1
Neurospora discreta
scaffold_6-snap.550.1
I
0.000
TRIATDRAFT_243083
Trichoderma atroviride
TRIATDRAFT_243083
I
0.000
TRIVIDRAFT_114462
Trichoderma virens
TRIVIDRAFT_114462
I
0.000
UV8b_8229
Ustilaginoidea virens
UV8b_8229
I
0.000
VDAG_01478
Verticillium dahliae
VDAG_01478
I
0.000
VDBG_04249
Verticillium alfalfae
VDBG_04249
I
0.000
VDBG_04249
Verticillium albo atrum
VDBG_04249
I
0.000
VHEMI00428
Torrubiella hemipterigena
VHEMI00428
I
0.000
X797_010800
Metarhizium robertsii
X797_010800
I
0.000
Z517_01830
Fonsecaea pedrosoi
Z517_01830
I
0.000