Thhalv10013882m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10013882m.g T143557_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP2
M06820_2.00 		Arabidopsis thaliana
YAGATAHMACCTNHNHND
HNDNDNAGGTKDTATCTR		 Dap-seq
OMalley et al.(2016)
At5g22890_col_a 		0.827 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10013882m C2H2 ZF 299 321
Thhalv10013882m C2H2 ZF 322 351

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

Invalid Input OrderBy

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action