Thhalv10015891m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10015891m.g T143565_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN

NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.774 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015891m C2H2 ZF 43 65

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH42217 Xenopus laevis AAH42217 I 0.000
AAI30161 Xenopus laevis AAI30161 I 0.000
Aan_R001440 Calypte anna Aan_R001440 I 0.000
Aan_R014295 Calypte anna Aan_R014295 I 0.000
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.000
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.000
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.000
CAA42778 Xenopus laevis CAA42778 I 0.000
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.000
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.000
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.000
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.000
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.000
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.000
YBX2 Bos taurus ENSBTAG00000009126 I 0.000
YBX3 Bos taurus ENSBTAG00000009663 I 0.000
YBX1 Bos taurus ENSBTAG00000017368 I 0.000
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.000
YBX1 Canis familiaris ENSCAFG00000002541 I 0.000
YBX3 Canis familiaris ENSCAFG00000013401 I 0.000
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.000
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.000
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.000
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.000
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.000
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.000
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.000
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.000
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.000
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.000
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.000
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.000
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.000
ybx1 Danio rerio ENSDARG00000004757 I 0.000
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.000
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.000
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.000
YBX2 Equus caballus ENSECAG00000009996 I 0.000
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.000
YBX3 Equus caballus ENSECAG00000013777 I 0.000
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.000
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.000
ENSEEUG00000007494 Erinaceus europaeus ENSEEUG00000007494 I 0.000
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.000
YBX3 Echinops telfairi ENSETEG00000002557 I 0.000
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.000
YBX2 Felis catus ENSFCAG00000018097 I 0.000
YBX3 Felis catus ENSFCAG00000027748 I 0.000
YBX3 Homo sapiens ENSG00000060138 I 0.000
YBX1 Homo sapiens ENSG00000065978 D 0.000
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.000
YBX1 Gallus gallus ENSGALG00000004848 I 0.000
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.000
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.000
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.000
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.000
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.000
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.000
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.000
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.000
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.000
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.000
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.000
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.000
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.000
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.000
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.000
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.000
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.000
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.000
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.000
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.000
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.000
Ybx2 Mus musculus ENSMUSG00000018554 I 0.000
Ybx1 Mus musculus ENSMUSG00000028639 I 0.000
Ybx3 Mus musculus ENSMUSG00000030189 I 0.000
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.000
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.000
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.000
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.000
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.000
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.000
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.000
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.000
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.000
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.000
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.000
ybx1 Oryzias latipes ENSORLG00000004225 I 0.000
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.000
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.000
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.000
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.000
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.000
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.000
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.000
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.000
YBX3 Procavia capensis ENSPCAG00000001397 I 0.000
YBX2 Procavia capensis ENSPCAG00000008019 I 0.000
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.000
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.000
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.000
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.000
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.000
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.000
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.000
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.000
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.000
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.000
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.000
YBX2 Sorex araneus ENSSARG00000000488 I 0.000
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.000
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.000
YBX3 Sus scrofa ENSSSCG00000000633 I 0.000
YBX2 Sus scrofa ENSSSCG00000017938 I 0.000
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.000
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.000
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.000
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.000
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.000
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.000
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.000
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.000
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.000
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.000
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.000
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.000
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.000
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.000
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.000
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.000
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.000
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.000
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.000
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.000
ybx1.S Xenopus laevis XB-GENE-865405 I 0.000