AAI57622 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AAI57622 T143618_2.00 Misc (2018-Jan-19)
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI. This record was defined by BC157621.1, which has been determined to be derived from Danio rerio. There is no evidence for this gene in Xenopus (Silurana) tropicalis.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AAI57622 C2H2 ZF 72 98
AAI57622 C2H2 ZF 104 126
AAI57622 C2H2 ZF 132 154
AAI57622 C2H2 ZF 160 182
AAI57622 C2H2 ZF 188 210
AAI57622 C2H2 ZF 216 233
AAI57622 C2H2 ZF 242 262
AAI57622 C2H2 ZF 268 290
AAI57622 C2H2 ZF 296 318
AAI57622 C2H2 ZF 324 346
AAI57622 C2H2 ZF 352 374

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
zgc:174703 Danio rerio ENSDARG00000103636 N 0.824
si:dkeyp-104f11.6 Danio rerio ENSDARG00000089158 N 0.824
si:dkey-199m13.4 Danio rerio ENSDARG00000103471 N 0.824
cldn12 Xenopus tropicalis XB-GENE-974236 N 0.823
si:dkey-26i24.1 Danio rerio ENSDARG00000102673 N 0.823
zgc:173702 Danio rerio ENSDARG00000103723 N 0.818
si:dkey-156k2.3 Danio rerio ENSDARG00000090160 N 0.816
si:dkeyp-44b5.5 Danio rerio ENSDARG00000102581 N 0.803
si:dkeyp-104f11.6 Danio rerio ENSDARG00000105306 N 0.789
CABZ01033540.1 Danio rerio ENSDARG00000101451 N 0.782
si:dkey-256i11.2 Danio rerio ENSDARG00000093713 N 0.778