CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CAA50392
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CAA50392
T143666_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAA50392
C2H2 ZF
202
223
FICCKCGDSFAHHSDLHTHLYA
CAA50392
C2H2 ZF
256
278
FKCTVCGKCFTLKNSLQLHHRIH
CAA50392
C2H2 ZF
284
306
FTCTECGKSFAQSCSLQLHSRTH
CAA50392
C2H2 ZF
312
334
YVCTECGKRFSSNSGLRRHMRTH
CAA50392
C2H2 ZF
340
362
YACKECGKFFSDLSTLHRHQNSH
CAA50392
C2H2 ZF
368
390
FICTECGKGFTLKDSLHRHQRTH
CAA50392
C2H2 ZF
396
418
FICSQCGKSYSQSSNLIKHQMIH
CAA50392
C2H2 ZF
424
446
FSCSECGKCFAVKDGLRNHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00505
Schistosoma haematobium
A_00505
N
0.000
A_02754
Schistosoma haematobium
A_02754
N
0.000
csin102848
Clonorchis sinensis
csin102848
N
0.000
csin102850
Clonorchis sinensis
csin102850
N
0.000
D915_00211
Fasciola hepatica
D915_00211
N
0.000
D915_00212
Fasciola hepatica
D915_00212
N
0.000
DILT_0001696201
Diphyllobothrium latum
DILT_0001696201
N
0.000
ECANG7_06502
Echinococcus canadensis
ECANG7_06502
N
0.000
ECPE_0000363401
Echinostoma caproni
ECPE_0000363401
N
0.000
HmN_000585600
Hymenolepis microstoma
HmN_000585600
N
0.000
HNAJ_0000830001
Hymenolepis nana
HNAJ_0000830001
N
0.000
MCOS_0000850601
Mesocestoides corti
MCOS_0000850601
N
0.000
SCUD_0000411301
Schistosoma curassoni
SCUD_0000411301
N
0.000
Sjc_0067910
Schistosoma japonicum
Sjc_0067910
N
0.000
Smp_157860
Schistosoma mansoni
Smp_157860
N
0.000
Smp_157870
Schistosoma mansoni
Smp_157870
N
0.000
SMRZ_0000063601
Schistosoma margrebowiei
SMRZ_0000063601
N
0.000
SMRZ_0000682801
Schistosoma margrebowiei
SMRZ_0000682801
N
0.000
SMTD_0000121801
Schistosoma mattheei
SMTD_0000121801
N
0.000
SMTD_0000598901
Schistosoma mattheei
SMTD_0000598901
N
0.000
SMU15003740
Schmidtea mediterranea
SMU15003740
N
0.000
SPER_0000785701
Spirometra erinaceieuropaei
SPER_0000785701
N
0.000
SROB_0000894001
Schistosoma rodhaini
SROB_0000894001
N
0.000
SROB_0001641201
Schistosoma rodhaini
SROB_0001641201
N
0.000
T265_00202
Opisthorchis viverrini
T265_00202
N
0.000
T265_12478
Opisthorchis viverrini
T265_12478
N
0.000
TRE_0001551901
Trichobilharzia regenti
TRE_0001551901
N
0.000
TsM_000931800
Taenia solium
TsM_000931800
N
0.000