HHAL002153-PA (Halyomorpha halys)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HHAL002153-PA T144013_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN

NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.799 0.857
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH

DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.799 0.857
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV

BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.799 0.857
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV

BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.799 0.857
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HHAL002153-PA C2H2 ZF 164 191
HHAL002153-PA C2H2 ZF 198 221
HHAL002153-PA C2H2 ZF 227 251
HHAL002153-PA C2H2 ZF 257 281

Links

Other C2H2 ZF family TFs
Other Halyomorpha halys TFs

Invalid Input OrderBy

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action