HHAL010124-PA (Halyomorpha halys)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HHAL010124-PA T144116_2.00 Misc (2018-Jan-19)
NCBI Gene Info:
This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ken
M06111_2.00
Drosophila melanogaster
ACTTTCWCY

RGWGAAAGT
B1H
Zhu et al.(2011)
ken_SANGER_10_FBgn0011236
0.778 0.899
ken
M06112_2.00
Drosophila melanogaster
NNRCTTTCWCYNNNN

NNNNRGWGAAAGYNN
B1H
Zhu et al.(2011)
ken_SOLEXA_5_FBgn0011236
0.778 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HHAL010124-PA C2H2 ZF 319 341
HHAL010124-PA C2H2 ZF 347 370
HHAL010124-PA C2H2 ZF 388 411

Links

Other C2H2 ZF family TFs
Other Halyomorpha halys TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action