CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP003636
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP003636
T144194_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clamp
M01044_2.00
Drosophila melanogaster
YNTCYBKYTC
GARMVRGANR
PBM
Soruco et al.(2013)
CLAMP_Cterm6Zn
0.814
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP003636-PA
C2H2 ZF
447
469
FTCNICGGTFSRYSSLWSHKKLH
LCUP003636-PA
C2H2 ZF
475
497
YKCSICGLAFAKAVYLKNHARIH
LCUP003636-PA
C2H2 ZF
503
525
YKCQTCGMQFSQSPHLKNHERTH
LCUP003636-PA
C2H2 ZF
531
553
YVCEVCDKGFARHATLWNHRRIH
LCUP003636-PA
C2H2 ZF
559
581
YKCDICGSAFSQAAHLKNHAKVH
LCUP003636-PA
C2H2 ZF
587
609
FKCDICSAAFADRFALKRHRGIH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy