LCUP006861 (Lucilia cuprina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LCUP006861 T144253_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sna
M03670_2.00
Drosophila melanogaster
TRCACCTGTYVB

VBRACAGGTGYA
SELEX
Nitta et al.(2015)
sna_1
0.797 0.921
sna
M05862_2.00
Drosophila melanogaster
NNVCACCTGTYNN

NNRACAGGTGBNN
SMiLE-seq
Isakova et al.(2017)
Sna
0.797 0.921
sna
M06069_2.00
Drosophila melanogaster
SMACYTGYBN

NVRCARGTKS
B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448
0.797 0.921
sna
M06070_2.00
Drosophila melanogaster
SCACCTGWYV

BRWCAGGTGS
B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448
0.797 0.921
sna
M06071_2.00
Drosophila melanogaster
MCACCTGTYVHNNN

NNNDBRACAGGTGK
B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448
0.797 0.921
sna
M09664_2.00
Drosophila melanogaster
VMACCTGYB

VRCAGGTKB
Misc
Kulakovskiy et al.(2009)
sna
0.797 0.921
sna
M10375_2.00
Drosophila melanogaster
NKRCACCTGTYNB

VNRACAGGTGYMN
Transfac
Matys et al.(2006)
I$SN_01
0.797 0.921
sna
M10376_2.00
Drosophila melanogaster
WSBHADCAVSTKSK

MSMASBTGHTDVSW
Transfac
Matys et al.(2006)
I$SN_02
0.797 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP006861-PA C2H2 ZF 270 292
LCUP006861-PA C2H2 ZF 305 327
LCUP006861-PA C2H2 ZF 331 353
LCUP006861-PA C2H2 ZF 359 381
LCUP006861-PA C2H2 ZF 387 408

Links

Other C2H2 ZF family TFs
Other Lucilia cuprina TFs

Invalid Input OrderBy

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action