CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP006862
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP006862
T144254_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.788
0.956
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.788
0.956
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.788
0.956
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.788
0.956
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.779
0.851
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP006862-PA
C2H2 ZF
353
375
YHCNDCGKSYSTFSGLTKHQQFH
LCUP006862-PA
C2H2 ZF
388
410
FNCKNCDKTYVSLGALKMHIRTH
LCUP006862-PA
C2H2 ZF
414
436
CKCPICGKAFSRPWLLQGHIRTH
LCUP006862-PA
C2H2 ZF
442
464
FSCQHCNRAFADRSNLRAHMQTH
LCUP006862-PA
C2H2 ZF
470
491
YSCPTCTKSFSRMSLLGKHLQS
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy