CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP015520
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP015520
T144374_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.815
0.939
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.815
0.939
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.815
0.939
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP015520-PA
C2H2 ZF
486
511
TNCHWQDCGIEFMTQDELVKHINNDH
LCUP015520-PA
C2H2 ZF
519
546
FVCRWEDCSRGEKPFKAQYMLVVHMRRH
LCUP015520-PA
C2H2 ZF
552
576
HKCTFEGCCKAYSRLENLKTHLRSH
LCUP015520-PA
C2H2 ZF
582
607
YTCEYPGCSKAFSNASDRAKHQNRTH
LCUP015520-PA
C2H2 ZF
613
638
YVCKAPGCIKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL012039
Aedes aegypti
AAEL012039
I
0.827
ASIS001386
Anopheles sinensis
ASIS001386
I
0.827
AMIN000086
Anopheles minimus
AMIN000086
I
0.824
ASTEI06951
Anopheles stephensi
ASTEI06951
I
0.824
AATE009625
Anopheles atroparvus
AATE009625
I
0.824
AMAM007692
Anopheles maculatus
AMAM007692
I
0.824
AFAF006125
Anopheles farauti
AFAF006125
I
0.824
AALB008266
Anopheles albimanus
AALB008266
I
0.824
ACHR002736
Anopheles christyi
ACHR002736
I
0.824
CpipJ_CPIJ000614
Culex pipiens
CpipJ_CPIJ000614
I
0.824
ADIR005874
Anopheles dirus
ADIR005874
I
0.824
AGAP004637
Anopheles gambiae
AGAP004637
I
0.824
ADAC002075
Anopheles darlingi
ADAC002075
I
0.824
AFUN004511
Anopheles funestus
AFUN004511
I
0.824
CPIJ000614
Culex quinquefasciatus
CPIJ000614
I
0.824
TC003000
Tribolium castaneum
TC003000
I
0.824
ACUA017715
Anopheles culicifacies
ACUA017715
I
0.824
GA27838
Drosophila pseudoobscura
FBgn0249202
I
0.822
GL18388
Drosophila persimilis
FBgn0155989
I
0.822
GH23992
Drosophila grimshawi
FBgn0131449
I
0.815
ci
Drosophila melanogaster
FBgn0004859
D
0.815
ci
Drosophila simulans
FBgn0012866
I
0.815
ci
Drosophila yakuba
FBgn0022826
I
0.815
GG16466
Drosophila erecta
FBgn0108697
I
0.815
GM23237
Drosophila sechellia
FBgn0178104
I
0.815
GK13666
Drosophila willistoni
FBgn0215674
I
0.813
GJ14655
Drosophila virilis
FBgn0201862
I
0.812
GI14119
Drosophila mojavensis
FBgn0136873
I
0.805
LotgiG119241
Lottia gigantea
LotgiG119241
I
0.798
HmN_000840400
Hymenolepis microstoma
HmN_000840400
I
0.794
TsM_000018800
Taenia solium
TsM_000018800
I
0.792
EmuJ_000711000
Echinococcus multilocularis
EmuJ_000711000
I
0.792
B_00892
Schistosoma haematobium
B_00892
I
0.781
LDEC013937
Leptinotarsa decemlineata
LDEC013937
I
0.778
GB54885
Apis mellifera
GB54885
I
0.778
KGM_04065
Danaus plexippus
KGM_04065
I
0.776
BGIBMGA004545
Bombyx mori
BGIBMGA004545
I
0.776
GF19046
Drosophila ananassae
FBgn0096058
I
0.775
L798_06214
Zootermopsis nevadensis
L798_06214
I
0.771
Sjc_0091950
Schistosoma japonicum
Sjc_0091950
I
0.771
ISCW005490
Ixodes scapularis
ISCW005490
I
0.769
PHUM413310
Pediculus humanus
PHUM413310
I
0.769
YQE_04546
Dendroctonus ponderosae
YQE_04546
N
0.767
DAPPUDRAFT_346973
Daphnia pulex
DAPPUDRAFT_346973
N
0.761
HMEL016327
Heliconius melpomene
HMEL016327
N
0.761
BGLB001304
Biomphalaria glabrata
BGLB001304
N
0.756