CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC013204
(
Leptinotarsa decemlineata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LDEC013204
T144696_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.773
0.867
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.773
0.867
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.773
0.867
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC013204-PA
C2H2 ZF
44
66
HECTECGKKYSTSSNLARHRQTH
LDEC013204-PA
C2H2 ZF
76
97
RCPHCDKIYVSMPAYSMHVRTH
LDEC013204-PA
C2H2 ZF
101
123
CKCLYCGKCFSRPWLLQGHIRTH
LDEC013204-PA
C2H2 ZF
129
151
FKCTICNKAFADKSNLRAHIQTH
LDEC013204-PA
C2H2 ZF
157
178
HVCGRCGKAFALKSYLYKHEES
Links
Other
C2H2 ZF
family TFs
Other
Leptinotarsa decemlineata
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy