LDEC013937 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC013937 T144714_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.766 0.913
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.766 0.913
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.766 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC013937-PA C2H2 ZF 324 349
LDEC013937-PA C2H2 ZF 357 384
LDEC013937-PA C2H2 ZF 390 414
LDEC013937-PA C2H2 ZF 420 445
LDEC013937-PA C2H2 ZF 451 476

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D915_05367 Fasciola hepatica D915_05367 N 0.784
T265_14352 Opisthorchis viverrini T265_14352 N 0.784
csin105947 Clonorchis sinensis csin105947 N 0.784
TC003000 Tribolium castaneum TC003000 I 0.781
ASIS001386 Anopheles sinensis ASIS001386 I 0.778
CpipJ_CPIJ000614 Culex pipiens CpipJ_CPIJ000614 I 0.778
AAEL012039 Aedes aegypti AAEL012039 I 0.778
LCUP015520 Lucilia cuprina LCUP015520 I 0.778
CapteG100127 Capitella teleta CapteG100127 N 0.778
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.778
ACHR002736 Anopheles christyi ACHR002736 I 0.776
AATE009625 Anopheles atroparvus AATE009625 I 0.776
ACUA017715 Anopheles culicifacies ACUA017715 I 0.776
AMIN000086 Anopheles minimus AMIN000086 I 0.776
AALB008266 Anopheles albimanus AALB008266 I 0.776
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.776
AMAM007692 Anopheles maculatus AMAM007692 I 0.776
AFUN004511 Anopheles funestus AFUN004511 I 0.776
AFAF006125 Anopheles farauti AFAF006125 I 0.776
ADIR005874 Anopheles dirus ADIR005874 I 0.776
GA27838 Drosophila pseudoobscura FBgn0249202 I 0.776
GL18388 Drosophila persimilis FBgn0155989 I 0.776
AGAP004637 Anopheles gambiae AGAP004637 I 0.776
ADAC002075 Anopheles darlingi ADAC002075 I 0.776
ci Drosophila yakuba FBgn0022826 I 0.766
ci Drosophila simulans FBgn0012866 I 0.766
ci Drosophila melanogaster FBgn0004859 D 0.766
GG16466 Drosophila erecta FBgn0108697 I 0.766
GH23992 Drosophila grimshawi FBgn0131449 I 0.766
GK13666 Drosophila willistoni FBgn0215674 I 0.766
GJ14655 Drosophila virilis FBgn0201862 I 0.766
GM23237 Drosophila sechellia FBgn0178104 I 0.766
HelroG111329 Helobdella robusta HelroG111329 I 0.761
GI14119 Drosophila mojavensis FBgn0136873 I 0.757