CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC013937
(
Leptinotarsa decemlineata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LDEC013937
T144714_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.766
0.913
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.766
0.913
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.766
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC013937-PA
C2H2 ZF
324
349
TNCHWKDCSTEFGTQEELVKHINNDH
LDEC013937-PA
C2H2 ZF
357
384
FVCRWEGCSRAEKPFKAQYMLVVHMRRH
LDEC013937-PA
C2H2 ZF
390
414
HKCTFEGCTKAYSRLENLKTHLRSH
LDEC013937-PA
C2H2 ZF
420
445
YTCEYPGCAKAFSNASDRAKHQNRTH
LDEC013937-PA
C2H2 ZF
451
476
YVCKAPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Leptinotarsa decemlineata
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy