LDEC013937 (Leptinotarsa decemlineata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LDEC013937 T144714_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.766 0.913
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.766 0.913
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.766 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC013937-PA C2H2 ZF 324 349
LDEC013937-PA C2H2 ZF 357 384
LDEC013937-PA C2H2 ZF 390 414
LDEC013937-PA C2H2 ZF 420 445
LDEC013937-PA C2H2 ZF 451 476

Links

Other C2H2 ZF family TFs
Other Leptinotarsa decemlineata TFs

Invalid Input OrderBy

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action