CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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NCU01629
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU01629
T144841_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01629
M01191_2.00
Neurospora crassa
TRYGSCRC
GYGSCRYA
PBM
Lambert et al.(2019)
pTH9692
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01191_2.00
C2H2 ZF
52
76
FQCEVKGCGKLFSRSYNYKAHLETH
M01191_2.00
C2H2 ZF
84
109
FPCQEAGCTKKFVRKTDLQRHHQSVH
M01191_2.00
C2H2 ZF
115
136
HKCDYCGRLFARKDTLRRHMED
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01629
C2H2 ZF
257
281
FQCEVKGCGKLFSRSYNYKAHLETH
NCU01629
C2H2 ZF
289
314
FPCQEAGCTKKFVRKTDLQRHHQSVH
NCU01629
C2H2 ZF
320
341
HKCDYCGRLFARKDTLRRHMED
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAC_02359
Sordaria macrospora
SMAC_02359
I
0.827
estExt_fgenesh3_kg.C_100506
Neurospora discreta
estExt_fgenesh3_kg.C_100506
I
0.827
NEUTE1DRAFT_130390
Neurospora tetrasperma
NEUTE1DRAFT_130390
I
0.827
THITE_2124193
Thielavia terrestris
THITE_2124193
I
0.823
VDAG_10032
Verticillium dahliae
VDAG_10032
I
0.823
VDBG_03423
Verticillium albo atrum
VDBG_03423
I
0.823
VDBG_03423
Verticillium alfalfae
VDBG_03423
I
0.823
MYCTH_2312442
Myceliophthora thermophila
MYCTH_2312442
I
0.820
CGGC5_5349
Colletotrichum gloeosporioides
CGGC5_5349
I
0.820
CHGG_10292
Chaetomium globosum
CHGG_10292
I
0.819
GGTG_10358
Gaeumannomyces graminis
GGTG_10358
I
0.816
F503_00525
Ophiostoma piceae uamh
F503_00525
I
0.816
Bcin13g04290
Botrytis cinerea
Bcin13g04290
I
0.816
SBOR_4904
Sclerotinia borealis
SBOR_4904
I
0.816
MAPG_02519
Magnaporthe poae
MAPG_02519
I
0.816
SS1G_09588
Sclerotinia sclerotiorum
SS1G_09588
I
0.816
MBM_09584
Marssonina brunnea
MBM_09584
I
0.812
MGG_03133
Magnaporthe oryzae
MGG_03133
I
0.811
PODANS_6_5390
Podospora anserina
PODANS_6_5390
I
0.807
OIDMADRAFT_123149
Oidiodendron maius
OIDMADRAFT_123149
I
0.800
CH063_01157
Colletotrichum higginsianum
CH063_01157
I
0.794
HMPREF1624_08709
Sporothrix schenckii
HMPREF1624_08709
I
0.791
PFICI_07315
Pestalotiopsis fici
PFICI_07315
I
0.790
CFIO01_13709
Colletotrichum fioriniae
CFIO01_13709
I
0.787
GLRG_08739
Colletotrichum graminicola
GLRG_08739
I
0.778
FOXG_13949
Fusarium oxysporum
FOXG_13949
I
0.777
FGRRES_04293
Fusarium graminearum
FGRRES_04293
I
0.777
NechaG101360
Fusarium solani
NechaG101360
I
0.777
FPSE_04814
Fusarium pseudograminearum
FPSE_04814
I
0.777
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008
Nectria haematococca
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008
I
0.777
FFUJ_09752
Fusarium fujikuroi
FFUJ_09752
I
0.777
ACRE_023020
Acremonium chrysogenum
ACRE_023020
I
0.773
S40285_07199
Stachybotrys chlorohalonata
S40285_07199
I
0.773
S40288_06328
Stachybotrys chartarum
S40288_06328
I
0.773
CSUB01_04852
Colletotrichum sublineola
CSUB01_04852
I
0.771
PFICI_04978
Pestalotiopsis fici
PFICI_04978
I
0.768
FVEG_11371
Fusarium verticillioides
FVEG_11371
I
0.764
e_gw1.2.1598.1
Cryphonectria parasitica
e_gw1.2.1598.1
I
0.761
OCS_00830
Ophiocordyceps sinensis
OCS_00830
I
0.758