rpn-4 (Neurospora crassa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NCU01640 T144842_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
rpn-4
M01873_2.00		 Neurospora crassa
DCGCCACY
RGTGGCGH		 PBM
Weirauch et al.(2014)
pTH8963		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01873_2.00 C2H2 ZF 52 77
M01873_2.00 C2H2 ZF 116 134
M01873_2.00 C2H2 ZF 141 166

DNA Binding Domains

Protein ID Domain From To Sequence
NCU01640 C2H2 ZF 560 585
NCU01640 C2H2 ZF 624 642
NCU01640 C2H2 ZF 649 674

Links

Other C2H2 ZF family TFs
Other Neurospora crassa TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.10.56.1 Neurospora discreta e_gw1.10.56.1 I 0.827
SMAC_02367 Sordaria macrospora SMAC_02367 I 0.827
NEUTE1DRAFT_147110 Neurospora tetrasperma NEUTE1DRAFT_147110 I 0.827