msn-1 (Neurospora crassa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NCU02671 T144846_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
msn-1
M01192_2.00		 Neurospora crassa
VCCCCTDW
WHAGGGGB		 PBM
Lambert et al.(2019)
pTH8923		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAGL0L06072g
M01033_2.00 		Candida glabrata
CCCCTDWNN
NNWHAGGGG		 PBM
Siggers et al.(2014)
CAGL0K06027gCgla 		0.756 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01192_2.00 C2H2 ZF 52 75
M01192_2.00 C2H2 ZF 81 103

DNA Binding Domains

Protein ID Domain From To Sequence
NCU02671 C2H2 ZF 450 473
NCU02671 C2H2 ZF 479 501

Links

Other C2H2 ZF family TFs
Other Neurospora crassa TFs

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142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action