CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU03975
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU03975
T144856_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.798
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01879_2.00
C2H2 ZF
52
74
YACSTCAKAFARRSDLARHERIH
M01879_2.00
C2H2 ZF
80
104
HVCDYPGCGKQFIQRSALTVHQRVH
M01879_2.00
C2H2 ZF
110
132
HQCERCGKPFSDSSSLARHRRIH
M01879_2.00
C2H2 ZF
138
162
YKCPYMDCQKTFTRRTTLTRHQNHH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03975
C2H2 ZF
215
237
YACSTCAKAFARRSDLARHERIH
NCU03975
C2H2 ZF
243
267
HVCDYPGCGKQFIQRSALTVHQRVH
NCU03975
C2H2 ZF
273
295
HQCERCGKPFSDSSSLARHRRIH
NCU03975
C2H2 ZF
301
325
YKCPYMDCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy