CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU06487
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU06487
T144872_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
(Direct)
(Direct)
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.789
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01197_2.00
C2H2 ZF
361
386
YVCKFQGCNAAPFQTQYLLNSHANVH
M01197_2.00
C2H2 ZF
392
421
HYCPVPGCSRGEGGRGFKRKNEMIRHGLVH
M01197_2.00
C2H2 ZF
426
452
YVCPFCPDREHKYPRPDNLQRHVRVHH
M01887_2.00
C2H2 ZF
52
77
YVCKFQGCNAAPFQTQYLLNSHANVH
M01887_2.00
C2H2 ZF
83
112
HYCPVPGCSRGEGGRGFKRKNEMIRHGLVH
M01887_2.00
C2H2 ZF
117
143
YVCPFCPDREHKYPRPDNLQRHVRVHH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU06487
C2H2 ZF
409
434
YVCKFQGCNAAPFQTQYLLNSHANVH
NCU06487
C2H2 ZF
440
469
HYCPVPGCSRGEGGRGFKRKNEMIRHGLVH
NCU06487
C2H2 ZF
474
500
YVCPFCPDREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy