CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU06907
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU06907
T144874_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01889_2.00
C2H2 ZF
52
76
WVCTYEDCRKRFGRKENIKSHVQTH
M01889_2.00
C2H2 ZF
82
104
YQCPTCKKCFVRQHDLKRHAKIH
M01889_2.00
C2H2 ZF
111
130
PCECGNSFARHDALTRHRQR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU06907.1
C2H2 ZF
530
554
WVCTYEDCRKRFGRKENIKSHVQTH
NCU06907.1
C2H2 ZF
560
582
YQCPTCKKCFVRQHDLKRHAKIH
NCU06907.1
C2H2 ZF
589
608
PCECGNSFARHDALTRHRQR
NCU06907.2
C2H2 ZF
530
554
WVCTYEDCRKRFGRKENIKSHVQTH
NCU06907.2
C2H2 ZF
560
582
YQCPTCKKCFVRQHDLKRHAKIH
NCU06907.2
C2H2 ZF
589
608
PCECGNSFARHDALTRHRQR
NCU06907.3
C2H2 ZF
513
537
WVCTYEDCRKRFGRKENIKSHVQTH
NCU06907.3
C2H2 ZF
543
565
YQCPTCKKCFVRQHDLKRHAKIH
NCU06907.3
C2H2 ZF
572
591
PCECGNSFARHDALTRHRQR
NCU06907.4
C2H2 ZF
513
537
WVCTYEDCRKRFGRKENIKSHVQTH
NCU06907.4
C2H2 ZF
543
565
YQCPTCKKCFVRQHDLKRHAKIH
NCU06907.4
C2H2 ZF
572
591
PCECGNSFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy