CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK05604.1
(
Cannabis sativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PK05604.1
T144888_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK05604.1
C2H2 ZF
17
38
CYYCDREFDDEKILVQHQKAKH
PK05604.1
C2H2 ZF
39
62
FKCHVCHKKLSTASGMAIHVLQVH
Links
Other
C2H2 ZF
family TFs
Other
Cannabis sativa
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc02g032120.2
Solanum lycopersicum
Solyc02g032120.2
N
0.815
Thhalv10008022m.g
Eutrema salsugineum
Thhalv10008022m.g
N
0.807
SUF4
Arabidopsis thaliana
AT1G30970
N
0.807
SUF4
Arabidopsis lyrata
fgenesh2_kg.1__3297__AT1G30970.1
N
0.807
Bra023153
Brassica rapa
Bra023153
N
0.807
Bo5g065610
Brassica oleracea
Bo5g065610
N
0.807
Cagra.1508s0093
Capsella grandiflora
Cagra.1508s0093
N
0.807
Bostr.15697s0404
Boechera stricta
Bostr.15697s0404
N
0.807
Pavir.Ba01662
Panicum virgatum
Pavir.Ba01662
N
0.803
Pavir.J03264
Panicum virgatum
Pavir.J03264
N
0.803
GRMZM2G081812
Zea mays
GRMZM2G081812
N
0.803
Si030356m.g
Setaria italica
Si030356m.g
N
0.803
Bo2g121020
Brassica oleracea
Bo2g121020
N
0.801
Bra039880
Brassica rapa
Bra039880
N
0.800
Sb02g032810
Sorghum bicolor
Sb02g032810
N
0.784