PK23301.1 (Cannabis sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PK23301.1 T144914_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STOP1
M06801_2.00
Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY

RRGKDDYAHCTGGKGVAGG
Dap-seq
OMalley et al.(2016)
STOP1_col_a
0.827 0.956
STOP1
M06802_2.00
Arabidopsis thaliana
RCCTNCMCCRGWWRN

NYWWCYGGKGNAGGY
Dap-seq
OMalley et al.(2016)
STOP1_colamp_a
0.827 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK23301.1 C2H2 ZF 360 382
PK23301.1 C2H2 ZF 381 412

Links

Other C2H2 ZF family TFs
Other Cannabis sativa TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL013544 Aedes aegypti AAEL013544 I 0.000
AATE009348 Anopheles atroparvus AATE009348 I 0.000
ACEP27848 Atta cephalotes ACEP27848 I 0.000
ACOM026725 Anopheles coluzzii ACOM026725 I 0.000
ACUA004708 Anopheles culicifacies ACUA004708 I 0.000
ACYPI004750 Acyrthosiphon pisum ACYPI004750 I 0.000
ADAC007677 Anopheles darlingi ADAC007677 I 0.000
AFAF007233 Anopheles farauti AFAF007233 I 0.000
AFUN008770 Anopheles funestus AFUN008770 I 0.000
AGAP009899 Anopheles gambiae AGAP009899 I 0.000
AMAM001551 Anopheles maculatus AMAM001551 I 0.000
AMEC014989 Anopheles melas AMEC014989 I 0.000
AMEM009101 Anopheles merus AMEM009101 I 0.000
AMIN006836 Anopheles minimus AMIN006836 I 0.000
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.000
ASIS008116 Anopheles sinensis ASIS008116 I 0.000
ASU_11043 Ascaris suum ASU_11043 I 0.000
Bm9026 Brugia malayi Bm9026 I 0.000
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.000
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.000
CLEC001135 Cimex lectularius CLEC001135 I 0.000
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.000
GA23784 Drosophila pseudoobscura FBgn0245183 I 0.000
GB42180 Apis mellifera GB42180 I 0.000
GD12837 Drosophila simulans FBgn0184562 I 0.000
GE20250 Drosophila yakuba FBgn0237569 I 0.000
GF23812 Drosophila ananassae FBgn0100806 I 0.000
GG13951 Drosophila erecta FBgn0106213 I 0.000
GI13870 Drosophila mojavensis FBgn0136624 I 0.000
GJ11729 Drosophila virilis FBgn0198983 I 0.000
GK18880 Drosophila willistoni FBgn0220878 I 0.000
GL15747 Drosophila persimilis FBgn0153351 I 0.000
GM24789 Drosophila sechellia FBgn0179651 I 0.000
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.000
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.000
HHAL008432-PA Halyomorpha halys HHAL008432-PA I 0.000
ISCW010362 Ixodes scapularis ISCW010362 I 0.000
klu Drosophila melanogaster FBgn0013469 D 0.000
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.000
L798_04121 Zootermopsis nevadensis L798_04121 I 0.000
L892_g30369 Steinernema scapterisci L892_g30369 I 0.000
L898_g5287 Steinernema monticolum L898_g5287 I 0.000
LCUP004097 Lucilia cuprina LCUP004097 I 0.000
LDEC006538 Leptinotarsa decemlineata LDEC006538 I 0.000
LOAG_17546 Loa loa LOAG_17546 I 0.000
MDOA010298 Musca domestica MDOA010298 I 0.000
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.000
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.000
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.000
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.000
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.000
NV17203 Nasonia vitripennis NV17203 I 0.000
PHUM540640 Pediculus humanus PHUM540640 I 0.000
PPA26808 Pristionchus pacificus PPA26808 I 0.000
PPAI001591 Phlebotomus papatasi PPAI001591 I 0.000
PTRK_0000952000 Parastrongyloides trichosuri PTRK_0000952000 I 0.000
PTRK_0001586500 Parastrongyloides trichosuri PTRK_0001586500 I 0.000
RPRC001140 Rhodnius prolixus RPRC001140 I 0.000
scaffold108-EXSNAP2012.21 Pristionchus exspectatus scaffold108-EXSNAP2012.21 I 0.000
SINV25082 Solenopsis invicta SINV25082 I 0.000
SMAR002322 Strigamia maritima SMAR002322 I 0.000
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.000
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.000
TC002783 Tribolium castaneum TC002783 I 0.000
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.000
YQE_09824 Dendroctonus ponderosae YQE_09824 I 0.000