CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PredSwiss_ASS2010_2976.1
(
Pneumocystis carinii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PredSwiss_ASS2010_2976.1
T144926_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_ASS2010_2976.1
C2H2 ZF
22
46
YLCTWEGCTKEFGRRSDLVRHKRIH
PredSwiss_ASS2010_2976.1
C2H2 ZF
52
76
YLCSYPCCGKSFIQRSALTVHERVH
PredSwiss_ASS2010_2976.1
C2H2 ZF
82
106
HVCEWPNCGKCFSDSSSLARHRRVH
PredSwiss_ASS2010_2976.1
C2H2 ZF
112
138
YLCEYPSCLRSFCRKTTLTKHIRRTHH
Links
Other
C2H2 ZF
family TFs
Other
Pneumocystis carinii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PredSwiss_EST219.1
Pneumocystis carinii
PredSwiss_EST219.1
N
0.827
PredSwiss_CON532.6
Pneumocystis carinii
PredSwiss_CON532.6
N
0.822
PNEG_01730
Pneumocystis murina
PNEG_01730
N
0.808
PredSwiss_EST317.1
Pneumocystis carinii
PredSwiss_EST317.1
N
0.767
UM03172
Ustilago maydis
UM03172
N
0.759
UHOR_04948
Ustilago hordei
UHOR_04948
N
0.759
PHSY_002793
Pseudozyma hubeiensis
PHSY_002793
N
0.759
sr14215
Sporisorium reilianum
sr14215
N
0.759
PaG_06097
Pseudozyma aphidis
PaG_06097
N
0.759