CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PredSwiss_CON370.1
(
Pneumocystis carinii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PredSwiss_CON370.1
T144937_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CaO19.723
M01037_2.00
Candida albicans
VCCCCTKD
HMAGGGGB
PBM
Siggers et al.(2014)
Bcr1_Orf19.723Calb
0.757
0.763
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PredSwiss_CON370.1
C2H2 ZF
1
16
MQFSRSEHLARHIRKH
PredSwiss_CON370.1
C2H2 ZF
22
44
FKCYCGRTFSRLDNFRQHAQTIH
Links
Other
C2H2 ZF
family TFs
Other
Pneumocystis carinii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy