Scas_Contig627.6 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig627.6 T144954_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YPR022C
M00043_2.00 		Saccharomyces cerevisiae
HCCCACNNN
NNNGTGGGD		 PBM
Badis et al.(2008)
YPR022C_4500 		0.757 0.761
YPR022C
M07472_2.00 		Saccharomyces cerevisiae
YCCCACN
NGTGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0436.1 		0.757 0.761
YPR022C
M08547_2.00 		Saccharomyces cerevisiae
YCCCACN
NGTGGGR		 Misc
DeBoer et al.(2011)
YPR022C_588 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig627.6 C2H2 ZF 42 66
Scas_Contig627.6 C2H2 ZF 72 102

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0B04500 Naumovozyma castellii NCAS_0B04500 I 0.827
23330_YPR022C Saccharomyces paradoxus 23330_YPR022C I 0.757
22363_YPR022C Saccharomyces mikatae 22363_YPR022C I 0.757
YPR022C Saccharomyces cerevisiae YPR022C D 0.757
SU7_3631 Saccharomyces arboricola SU7_3631 I 0.757