Scas_Contig693.31 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig693.31 T144965_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SWI5
M00020_2.00
Saccharomyces cerevisiae
NNKGCTGGTHN

NDACCAGCMNN
PBM
Badis et al.(2008)
SWI5_2037
0.770 0.857
SWI5
M07450_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0402.1
0.770 0.857
SWI5
M08516_2.00
Saccharomyces cerevisiae
KGCTGGKH

DMCCAGCM
Misc
DeBoer et al.(2011)
YDR146C_569
0.770 0.857
ACE2
M00033_2.00
Saccharomyces cerevisiae
NTGCTGGBYN

NRVCCAGCAN
PBM
Badis et al.(2008)
ACE2_2082
0.761 0.825
ACE2
M07463_2.00
Saccharomyces cerevisiae
NGCTGGB

VCCAGCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0267.1
0.761 0.825
ACE2
M08534_2.00
Saccharomyces cerevisiae
NGCTGGBH

DVCCAGCN
Misc
DeBoer et al.(2011)
YLR131C_1332
0.761 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig693.31 C2H2 ZF 489 513
Scas_Contig693.31 C2H2 ZF 519 543
Scas_Contig693.31 C2H2 ZF 552 568

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCAS_0B03600 Naumovozyma castellii NCAS_0B03600 I 0.827
NDAI_0J00990 Naumovozyma dairenensis NDAI_0J00990 I 0.803
TDEL_0F04510 Torulaspora delbrueckii TDEL_0F04510 I 0.797
KNAG_0A05170 Kazachstania naganishii KNAG_0A05170 I 0.797
KAFR_0B05740 Kazachstania africana KAFR_0B05740 I 0.794
CAGL0E01331g Candida glabrata CAGL0E01331g I 0.784
3580_YDR146C Saccharomyces mikatae 3580_YDR146C I 0.770
4284_YDR146C Saccharomyces paradoxus 4284_YDR146C I 0.770
4131_Multiple Saccharomyces bayanus 4131_Multiple I 0.770
SWI5 Saccharomyces cerevisiae YDR146C D 0.770
Kpol_1036p70 Vanderwaltozyma polyspora Kpol_1036p70 I 0.768
ZBAI_00695 Zygosaccharomyces bailii ZBAI_00695 N 0.767
ZBAI_05991 Zygosaccharomyces bailii ZBAI_05991 N 0.767
ZYRO0F10428g Zygosaccharomyces rouxii ZYRO0F10428g N 0.767
14324_YLR131C Saccharomyces paradoxus 14324_YLR131C I 0.761
ACE2 Saccharomyces cerevisiae YLR131C D 0.761
TBLA_0H01260 Tetrapisispora blattae TBLA_0H01260 N 0.758