Scas_Contig707.46 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig707.46 T144970_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMR3
M00042_2.00 		Saccharomyces cerevisiae
HGTARATCN
NGATYTACD		 PBM
Badis et al.(2008)
YPR013C_2104 		0.792 0.913
CMR3
M01539_2.00 		Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN		 PBM
Zhu et al.(2009)
Ypr013c 		0.792 0.913
CMR3
M07471_2.00 		Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1 		0.792 0.913
CMR3
M08545_2.00 		Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN		 Misc
DeBoer et al.(2011)
YPR013C_859 		0.792 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig707.46 C2H2 ZF 270 292
Scas_Contig707.46 C2H2 ZF 298 322

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0C04230 Naumovozyma castellii NCAS_0C04230 I 0.827
ZBAI_03368 Zygosaccharomyces bailii ZBAI_03368 I 0.798
KAFR_0C03140 Kazachstania africana KAFR_0C03140 I 0.797
CMR3 Saccharomyces cerevisiae YPR013C D 0.792
TDEL_0F01170 Torulaspora delbrueckii TDEL_0F01170 I 0.792
ZBAI_08373 Zygosaccharomyces bailii ZBAI_08373 I 0.792
ZYRO0E02684g Zygosaccharomyces rouxii ZYRO0E02684g I 0.792
25590_YPR013C Saccharomyces bayanus 25590_YPR013C I 0.792
23365_YPR013C Saccharomyces paradoxus 23365_YPR013C I 0.792
22332_YPR013C Saccharomyces mikatae 22332_YPR013C I 0.792
SU7_3626 Saccharomyces arboricola SU7_3626 I 0.792
SKUD_171403 Saccharomyces kudriavzevii SKUD_171403 I 0.792
KAFR_0B01990 Kazachstania africana KAFR_0B01990 I 0.792
CAGL0J01595g Candida glabrata CAGL0J01595g I 0.792
SAKL0H20416g Lachancea kluyveri SAKL0H20416g I 0.791
CAGL0L05786g Candida glabrata CAGL0L05786g I 0.788
NDAI_0B02080 Naumovozyma dairenensis NDAI_0B02080 I 0.787
TBLA_0E03930 Tetrapisispora blattae TBLA_0E03930 I 0.782
KNAG_0D02290 Kazachstania naganishii KNAG_0D02290 I 0.772
NDAI_0B01940 Naumovozyma dairenensis NDAI_0B01940 I 0.771
KNAG_0G01140 Kazachstania naganishii KNAG_0G01140 I 0.768
KAFR_0B02000 Kazachstania africana KAFR_0B02000 I 0.768