SMU15001129 (Schmidtea mediterranea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMU15001129 T145083_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY

RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.773 0.725
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH

DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.773 0.725
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15001129 C2H2 ZF 139 163
SMU15001129 C2H2 ZF 169 193
SMU15001129 C2H2 ZF 199 221

Links

Other C2H2 ZF family TFs
Other Schmidtea mediterranea TFs

Invalid Input OrderBy

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action