SMU15022318 (Schmidtea mediterranea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMU15022318 T145141_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15022318 C2H2 ZF 216 238
SMU15022318 C2H2 ZF 244 266
SMU15022318 C2H2 ZF 273 296

Links

Other C2H2 ZF family TFs
Other Schmidtea mediterranea TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29648.m002012 Ricinus communis 29648.m002012 I 0.000
30193.m000709 Ricinus communis 30193.m000709 I 0.000
AMTR_s00009p00259320 Amborella trichopoda AMTR_s00009p00259320 I 0.000
anac032 Arabidopsis lyrata scaffold_202708.1 I 0.000
anac032 Vitis vinifera VIT_18s0001g02300 I 0.000
ANAC102 Arabidopsis lyrata Al_scaffold_0008_2913 I 0.000
ANAC102 Arabidopsis thaliana AT5G63790 I 0.000
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.000
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.000
ATAF2 Arabidopsis lyrata scaffold_600916.1 I 0.000
BGIOSGA013814 Oryza indica BGIOSGA013814 I 0.000
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.000
BGIOSGA034376 Oryza indica BGIOSGA034376 I 0.000
BGIOSGA034377 Oryza indica BGIOSGA034377 I 0.000
Bo02109s010 Brassica oleracea Bo02109s010 I 0.000
Bo2g009250 Brassica oleracea Bo2g009250 I 0.000
Bo2g092550 Brassica oleracea Bo2g092550 I 0.000
Bo2g165880 Brassica oleracea Bo2g165880 I 0.000
Bo3g005100 Brassica oleracea Bo3g005100 I 0.000
Bo5g001100 Brassica oleracea Bo5g001100 I 0.000
Bo9g174170 Brassica oleracea Bo9g174170 I 0.000
Bostr.0568s0429 Boechera stricta Bostr.0568s0429 I 0.000
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I 0.000
Bostr.20129s0180 Boechera stricta Bostr.20129s0180 I 0.000
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.000
Bra006015 Brassica rapa Bra006015 I 0.000
Bra008309 Brassica rapa Bra008309 I 0.000
Bra009370 Brassica rapa Bra009370 I 0.000
Bra028645 Brassica rapa Bra028645 I 0.000
Bra029201 Brassica rapa Bra029201 I 0.000
Bra033239 Brassica rapa Bra033239 I 0.000
Bra038663 Brassica rapa Bra038663 I 0.000
BRADI1G04150 Brachypodium distachyon BRADI1G04150 I 0.000
BRADI2G24987 Brachypodium distachyon BRADI2G24987 I 0.000
Cagra.0096s0087 Capsella grandiflora Cagra.0096s0087 I 0.000
Cagra.0248s0059 Capsella grandiflora Cagra.0248s0059 I 0.000
Cagra.1365s0094 Capsella grandiflora Cagra.1365s0094 I 0.000
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.000
Carubv10003254m.g Capsella rubella Carubv10003254m.g I 0.000
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.000
Carubv10020834m.g Capsella rubella Carubv10020834m.g I 0.000
Carubv10026953m.g Capsella rubella Carubv10026953m.g I 0.000
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.000
cassava5772.m1 Manihot esculenta cassava5772.m1 I 0.000
Ca_04233 Cicer arietinum Ca_04233 I 0.000
Ca_12660 Cicer arietinum Ca_12660 I 0.000
Ca_16946 Cicer arietinum Ca_16946 I 0.000
chr4.LjT06B21.210.nd Lotus japonicus chr4.LjT06B21.210.nd I 0.000
Ciclev10001956m.g Citrus clementina Ciclev10001956m.g I 0.000
Ciclev10001976m.g Citrus clementina Ciclev10001976m.g I 0.000
Cla014135 Citrullus lanatus Cla014135 I 0.000
Cla023536 Citrullus lanatus Cla023536 I 0.000
Cucsa.060600 Cucumis sativus Cucsa.060600 I 0.000
Cucsa.125330 Cucumis sativus Cucsa.125330 I 0.000
Cucsa.228100 Cucumis sativus Cucsa.228100 I 0.000
Eucgr.F04341 Eucalyptus grandis Eucgr.F04341 I 0.000
Eucgr.H05089 Eucalyptus grandis Eucgr.H05089 I 0.000
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I 0.000
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I 0.000
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I 0.000
Eucgr.I00059 Eucalyptus grandis Eucgr.I00059 I 0.000
Eucgr.I00060 Eucalyptus grandis Eucgr.I00060 I 0.000
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I 0.000
Eucgr.I00099 Eucalyptus grandis Eucgr.I00099 I 0.000
Eucgr.I00100 Eucalyptus grandis Eucgr.I00100 I 0.000
Eucgr.I00101 Eucalyptus grandis Eucgr.I00101 I 0.000
evm.TU.supercontig_37.28 Carica papaya evm.TU.supercontig_37.28 I 0.000
evm.TU.supercontig_64.115 Carica papaya evm.TU.supercontig_64.115 I 0.000
F775_52139 Aegilops tauschii F775_52139 N 0.000
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I 0.000
gene24179-v1.0-hybrid Fragaria vesca gene24179-v1.0-hybrid I 0.000
GLYMA02G26480 Glycine max GLYMA02G26480 I 0.000
GLYMA04G38560 Glycine max GLYMA04G38560 I 0.000
GLYMA04G42800 Glycine max GLYMA04G42800 I 0.000
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.000
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.000
GLYMA06G16440 Glycine max GLYMA06G16440 I 0.000
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.000
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.000
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.000
Gorai.012G037600 Gossypium raimondii Gorai.012G037600 I 0.000
GRMZM2G018553 Zea mays GRMZM2G018553 I 0.000
GRMZM2G123667 Zea mays GRMZM2G123667 I 0.000
GRMZM2G180328 Zea mays GRMZM2G180328 I 0.000
GRMZM2G312201 Zea mays GRMZM2G312201 N 0.000
GRMZM2G336533 Zea mays GRMZM2G336533 I 0.000
GRMZM2G347043 Zea mays GRMZM2G347043 I 0.000
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.000
GSMUA_Achr3G18990_001 Musa acuminata GSMUA_Achr3G18990_001 I 0.000
GSMUA_Achr5G07590_001 Musa acuminata GSMUA_Achr5G07590_001 I 0.000
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.000
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.000
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I 0.000
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.000
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.000
LPERR03G32860 Leersia perrieri LPERR03G32860 I 0.000
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.000
LPERR11G04670 Leersia perrieri LPERR11G04670 I 0.000
Lus10018142.g Linum usitatissimum Lus10018142.g I 0.000
Lus10020883.g Linum usitatissimum Lus10020883.g I 0.000
Lus10025690.g Linum usitatissimum Lus10025690.g I 0.000
Lus10029692.g Linum usitatissimum Lus10029692.g N 0.000
Lus10033493.g Linum usitatissimum Lus10033493.g I 0.000
mgf002183m Mimulus guttatus mgf002183m I 0.000
mgf015596m Mimulus guttatus mgf015596m I 0.000
MLOC_37104 Hordeum vulgare MLOC_37104 I 0.000
MLOC_63743 Hordeum vulgare MLOC_63743 I 0.000
MLOC_70929 Hordeum vulgare MLOC_70929 N 0.000
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.000
MTR_3g096920 Medicago truncatula MTR_3g096920 I 0.000
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.000
NAC002 Arabidopsis thaliana AT1G01720 D 0.000
NAC032 Arabidopsis thaliana AT1G77450 I 0.000
NAC081 Arabidopsis thaliana AT5G08790 I 0.000
NAC71 Oryza sativa OS11G0184900 I 0.000
OB03G45600 Oryza brachyantha OB03G45600 I 0.000
OB05G24820 Oryza brachyantha OB05G24820 I 0.000
OB11G14310 Oryza brachyantha OB11G14310 I 0.000
OBART03G38670 Oryza barthii OBART03G38670 I 0.000
OBART11G05220 Oryza barthii OBART11G05220 I 0.000
OGLUM03G38490 Oryza glumaepatula OGLUM03G38490 I 0.000
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.000
OGLUM11G05010 Oryza glumaepatula OGLUM11G05010 I 0.000
OLONG_000792 Oryza longistaminata OLONG_000792 I 0.000
OLONG_018385 Oryza longistaminata OLONG_018385 I 0.000
OMERI03G35600 Oryza meridionalis OMERI03G35600 I 0.000
OMERI11G04290 Oryza meridionalis OMERI11G04290 I 0.000
ONIVA03G40320 Oryza nivara ONIVA03G40320 I 0.000
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.000
ONIVA11G05560 Oryza nivara ONIVA11G05560 I 0.000
OPUNC03G35740 Oryza punctata OPUNC03G35740 I 0.000
OPUNC11G05010 Oryza punctata OPUNC11G05010 I 0.000
orange1.1g021910m.g Citrus sinensis orange1.1g021910m.g I 0.000
ORGLA03G0354300 Oryza glaberrima ORGLA03G0354300 I 0.000
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.000
ORGLA11G0050000 Oryza glaberrima ORGLA11G0050000 I 0.000
ORUFI03G40310 Oryza rufipogon ORUFI03G40310 I 0.000
ORUFI11G05080 Oryza rufipogon ORUFI11G05080 I 0.000
OS03G0815100 Oryza sativa OS03G0815100 I 0.000
Pavir.Ha00897 Panicum virgatum Pavir.Ha00897 I 0.000
Pavir.Ia00158 Panicum virgatum Pavir.Ia00158 I 0.000
Pavir.J04666 Panicum virgatum Pavir.J04666 I 0.000
Pavir.J30396 Panicum virgatum Pavir.J30396 I 0.000
Pavir.J34979 Panicum virgatum Pavir.J34979 I 0.000
PGSC0003DMG400009245 Solanum tuberosum PGSC0003DMG400009245 I 0.000
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I 0.000
PGSC0003DMG400032555 Solanum tuberosum PGSC0003DMG400032555 I 0.000
PK25206.1 Cannabis sativa PK25206.1 I 0.000
PK26157.1 Cannabis sativa PK26157.1 I 0.000
Pm004758 Prunus mume Pm004758 I 0.000
Pm012630 Prunus mume Pm012630 I 0.000
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I 0.000
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.000
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.000
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.000
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I 0.000
PRUPE_ppa009438mg Prunus persica PRUPE_ppa009438mg I 0.000
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I 0.000
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.000
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.000
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.000
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.000
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.000
Sb01g003710 Sorghum bicolor Sb01g003710 I 0.000
Sb05g005450 Sorghum bicolor Sb05g005450 I 0.000
Sb09g020750 Sorghum bicolor Sb09g020750 I 0.000
Si022381m.g Setaria italica Si022381m.g I 0.000
Si026342m.g Setaria italica Si026342m.g I 0.000
Si036695m.g Setaria italica Si036695m.g I 0.000
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.000
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I 0.000
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.000
TCM_001595 Theobroma cacao TCM_001595 I 0.000
TCM_035160 Theobroma cacao TCM_035160 I 0.000
Thhalv10004786m.g Eutrema salsugineum Thhalv10004786m.g I 0.000
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I 0.000
Thhalv10014325m.g Eutrema salsugineum Thhalv10014325m.g I 0.000
Thhalv10018998m.g Eutrema salsugineum Thhalv10018998m.g I 0.000
TRAES3BF094400050CFD_g Triticum aestivum TRAES3BF094400050CFD_g N 0.000
Traes_5BL_4497A137C Triticum aestivum Traes_5BL_4497A137C I 0.000
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I 0.000