SNAPOd2T00000985001 (Oikopleura dioica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SNAPOd2T00000985001 T145219_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY

RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.757 0.768
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH

DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.757 0.768
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH

DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.757 0.710
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00000985001 C2H2 ZF 156 180
SNAPOd2T00000985001 C2H2 ZF 186 210
SNAPOd2T00000985001 C2H2 ZF 216 238

Links

Other C2H2 ZF family TFs
Other Oikopleura dioica TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_kg.4__494__AT2G25820.1 Arabidopsis lyrata fgenesh2_kg.4__494__AT2G25820.1 N 0.000
Ca_22502 Cicer arietinum Ca_22502 N 0.000
Traes_2DL_D2EA554EA Triticum aestivum Traes_2DL_D2EA554EA N 0.000
XM_002324763.1 Populus trichocarpa POPTR_0018s00270 N 0.000
GSMUA_AchrUn_randomG27090_001 Musa acuminata GSMUA_AchrUn_randomG27090_001 N 0.000
GSMUA_Achr7G06970_001 Musa acuminata GSMUA_Achr7G06970_001 N 0.000
GSMUA_Achr5G15330_001 Musa acuminata GSMUA_Achr5G15330_001 N 0.000
GSMUA_Achr5G13500_001 Musa acuminata GSMUA_Achr5G13500_001 N 0.000
GSMUA_Achr5G06570_001 Musa acuminata GSMUA_Achr5G06570_001 N 0.000
Eucgr.C00590 Eucalyptus grandis Eucgr.C00590 N 0.000