fezf2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1006432 T145340_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN

NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.814 0.964
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN

NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.814 0.964
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT

AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.794 0.899
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT

AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.794 0.899
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN

NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.794 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI36189 C2H2 ZF 254 276
AAI36189 C2H2 ZF 282 304
AAI36189 C2H2 ZF 310 332
AAI36189 C2H2 ZF 338 360
AAI36189 C2H2 ZF 366 388
AAI36189 C2H2 ZF 394 417
CAJ83894 C2H2 ZF 254 276
CAJ83894 C2H2 ZF 282 304
CAJ83894 C2H2 ZF 310 332
CAJ83894 C2H2 ZF 338 360
CAJ83894 C2H2 ZF 366 388
CAJ83894 C2H2 ZF 394 417

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action