CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf143.S
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1012509
T145347_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.821
0.957
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.821
0.957
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.821
0.957
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.821
0.957
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.821
0.957
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.821
0.957
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.821
0.957
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.821
0.957
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.768
0.851
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.768
0.851
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.768
0.851
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.768
0.851
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH71051
C2H2 ZF
218
242
FRCDYEGCGKLYTTAHHLKVHERSH
AAH71051
C2H2 ZF
248
272
YQCDHGSCRKAFATGYGLKSHVRTH
AAH71051
C2H2 ZF
278
302
YRCSEENCTKSFKTSGDLQKHVRTH
AAH71051
C2H2 ZF
308
332
FKCPFEGCGRSFTTSNIRKVHIRTH
AAH71051
C2H2 ZF
338
362
YYCSEPGCGRAFASATNYKNHVRIH
AAH71051
C2H2 ZF
368
392
YVCTVPGCDKRFTEYSSLYKHHVVH
AAH71051
C2H2 ZF
398
421
YNCNHCGKTYKQISTLAMHKRTAH
CAA59354
C2H2 ZF
265
289
FRCDYEGCGKLYTTAHHLKVHERSH
CAA59354
C2H2 ZF
295
319
YQCDHGSCRKAFATGYGLKSHVRTH
CAA59354
C2H2 ZF
325
349
YRCSEENCTKSFKTSGDLQKHVRTH
CAA59354
C2H2 ZF
355
379
FKCPFEGCGRSFTTSNIRKVHIRTH
CAA59354
C2H2 ZF
385
409
YYCSEPGCGRAFASATNYKNHVRIH
CAA59354
C2H2 ZF
415
439
YVCTVPGCDKRFTEYSSLYKHHVVH
CAA59354
C2H2 ZF
445
468
YNCNHCGKTYKQISTLAMHKRTAH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy