prdm15 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-1013930 T145352_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM15
M10222_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM15_04
0.762 0.909
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002941334 C2H2 ZF 517 539
XP_002941334 C2H2 ZF 544 567
XP_002941334 C2H2 ZF 578 596
XP_002941334 C2H2 ZF 605 627
XP_002941334 C2H2 ZF 632 654
XP_002941334 C2H2 ZF 682 703
XP_002941334 C2H2 ZF 708 730
XP_002941334 C2H2 ZF 771 794
XP_002941334 C2H2 ZF 799 821
XP_002941334 C2H2 ZF 835 857
XP_002941334 C2H2 ZF 865 885
XP_002941334 C2H2 ZF 891 913
XP_002941334 C2H2 ZF 919 941
XP_002941334 C2H2 ZF 947 969
XP_002941334 C2H2 ZF 975 998
XP_002941334 C2H2 ZF 1004 1027

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action