CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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klf8.L
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1021778
T145374_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN
NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.795
0.913
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.795
0.913
Klf8
M09000_2.00
Mus musculus
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.795
0.913
KLF8
M10147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.795
0.913
KLF8
M10148_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.795
0.913
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH
DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.785
0.928
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.785
0.928
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.785
0.928
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.785
0.928
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.785
0.928
KLF12
M10186_2.00
Homo sapiens
HMYACDG
CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.785
0.928
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.785
0.928
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.785
0.928
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.779
0.928
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.779
0.928
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.779
0.928
KLF3
M10172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.779
0.928
KLF3
M10173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.779
0.928
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.779
0.928
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.779
0.928
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH
DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.775
0.812
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH
DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.775
0.812
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.775
0.812
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.775
0.812
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH
DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.775
0.812
KLF5
M10149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.775
0.812
KLF5
M10150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.775
0.812
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH
DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.775
0.812
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH
DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.768
0.783
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.768
0.783
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.768
0.783
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.768
0.783
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.768
0.783
dar1
M06171_2.00
Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY
B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454
0.758
0.768
dar1
M06172_2.00
Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN
B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454
0.758
0.768
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI70083
C2H2 ZF
272
296
HQCDFEGCNKVYTKSSHLKAHRRIH
AAI70083
C2H2 ZF
302
326
YKCTWLGCTWKFARSDELTRHFRKH
AAI70083
C2H2 ZF
332
354
FLCLDCDRSFSRSDHLALHRRRH
BAC77069
C2H2 ZF
272
296
HQCDFEGCNKVYTKSSHLKAHRRIH
BAC77069
C2H2 ZF
302
326
YKCTWLGCTWKFARSDELTRHFRKH
BAC77069
C2H2 ZF
332
354
FLCLDCDRSFSRSDHLALHRRRH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
394 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy