CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf740
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1219010
T145391_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN
NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.803
0.838
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN
NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.803
0.838
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH
DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.803
0.838
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY
RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.787
0.824
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY
RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.787
0.824
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.787
0.824
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC
GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.787
0.824
ZNF740
M10221_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.787
0.824
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY
RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.787
0.824
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC
GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.787
0.824
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH76952
C2H2 ZF
99
121
YICEHCYGAFRSSYHLKRHQYIH
AAH76952
C2H2 ZF
127
149
YECDMCEMKFIQKYHLDRHKRVH
AAH76952
C2H2 ZF
155
176
YQCERCQQAFSRTDRLLRHKRM
XP_002936682
C2H2 ZF
124
146
YICEHCYGAFRSSYHLKRHQYIH
XP_002936682
C2H2 ZF
152
174
YECDMCEMKFIQKYHLDRHKRVH
XP_002936682
C2H2 ZF
180
201
YQCERCQQAFSRTDRLLRHKRM
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy