CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf238.2
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-1219066
T145393_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB42
M08351_2.00
Homo sapiens
MRCAKCTGS
SCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
B2RXF5_2-4.RCADE
0.782
0.890
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002940762
C2H2 ZF
377
399
CICPLCSKVFPSPHVLQLHLSSH
XP_002940762
C2H2 ZF
418
439
TCTICGKTFSCMYTLKRHERTH
XP_002940762
C2H2 ZF
445
467
YTCGQCGKSFQYSHNLSRHAVVH
XP_002940762
C2H2 ZF
473
496
HACKWCERRFTQSGDLYRHIRKFH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy