klf13 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-479837 T145412_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KLF13
M02903_2.00
Homo sapiens
DDRMCACGCCCCYTTNDK

MHNAARGGGGCGTGKYHH
SELEX
Jolma et al.(2013)
KLF13_1
0.804 0.957
KLF13
M04537_2.00
Homo sapiens
NRCCACRCCCMCN

NGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX
0.804 0.957
KLF13
M04539_2.00
Homo sapiens
NRCCACRCCCMYN

NRKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX
0.804 0.957
KLF13
M04538_2.00
Homo sapiens
NRCCACRCCCMCH

DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX
0.804 0.957
KLF13
M04540_2.00
Homo sapiens
NRCCACRCCCMCH

DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX
0.804 0.957
Klf9
M00777_2.00
Mus musculus
NCCGTTAN

NTAACGGN
PBM
Weirauch et al.(2013)
pTH2353
0.764 0.841
KLF9
M08088_2.00
Homo sapiens
NVMCACACCCMBN

NVKGGGTGTGKBN
ChIP-seq
Mathelier et al.(2014)
MA1107.1
0.764 0.841
KLF9
M08880_2.00
Homo sapiens
NGCCMCGCCCMCBBS

SVVGKGGGCGKGGCN
Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C
0.764 0.841
Klf9
M10345_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB1_01
0.764 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI35952 C2H2 ZF 136 160
AAI35952 C2H2 ZF 166 190
AAI35952 C2H2 ZF 196 218

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007114 Ailuropoda melanoleuca ENSAMEG00000007114 I 0.764
Alligator_sinensis_CCG010361.1 Alligator sinensis Alligator_sinensis_CCG010361.1 I 0.764
ENSAPLG00000006681 Anas platyrhynchos ENSAPLG00000006681 I 0.804
ENSACAG00000003119 Anolis carolinensis ENSACAG00000003119 I 0.800
KLF10 Anolis carolinensis ENSACAG00000009177 I 0.757
Afo_R014961 Aptenodytes forsteri Afo_R014961 I 0.812
ENSAMXG00000000331 Astyanax mexicanus ENSAMXG00000000331 I 0.767
ENSBTAP00000021593-D1 Bos grunniens ENSBTAP00000021593-D1 I 0.764
KLF9 Bos taurus ENSBTAG00000016229 I 0.764
KLF13 Callithrix jacchus ENSCJAG00000017617 I 0.804
KLF9 Callithrix jacchus ENSCJAG00000001575 I 0.764
Aan_R015091 Calypte anna Aan_R015091 I 0.812
ENSCPOG00000005302 Cavia porcellus ENSCPOG00000005302 I 0.764
Cmyd_10017062 Chelonia mydas Cmyd_10017062 I 0.764
ENSCSAG00000006853 Chlorocebus sabaeus ENSCSAG00000006853 I 0.804
ENSCSAG00000008358 Chlorocebus sabaeus ENSCSAG00000008358 I 0.764
klf13 Danio rerio ENSDARG00000061368 I 0.767
DAPPUDRAFT_312628 Daphnia pulex DAPPUDRAFT_312628 I 0.769
KLF9 Dasypus novemcinctus ENSDNOG00000018839 I 0.764
KLF13 Echinops telfairi ENSETEG00000014330 I 0.784
KLF9 Equus caballus ENSECAG00000024925 I 0.764
ENSFALG00000006648 Ficedula albicollis ENSFALG00000006648 I 0.770
ENSGMOG00000017411 Gadus morhua ENSGMOG00000017411 I 0.764
ENSGMOG00000002059 Gadus morhua ENSGMOG00000002059 I 0.767
KLF9 Gallus gallus ENSGALG00000027374 I 0.764
ENSGALG00000026590 Gallus gallus ENSGALG00000026590 I 0.820
klf9 Gasterosteus aculeatus ENSGACG00000010668 I 0.764
ENSGACG00000010739 Gasterosteus aculeatus ENSGACG00000010739 I 0.767
Gfo_R015265 Geospiza fortis Gfo_R015265 I 0.760
Gfo_R008822 Geospiza fortis Gfo_R008822 I 0.812
KLF9 Gorilla gorilla ENSGGOG00000025900 I 0.764
KLF13 Homo sapiens ENSG00000169926 D 0.804
KLF9 Homo sapiens ENSG00000119138 D 0.764
ENSSTOG00000022758 Ictidomys tridecemlineatus ENSSTOG00000022758 I 0.804
ENSSTOG00000000238 Ictidomys tridecemlineatus ENSSTOG00000000238 I 0.764
ENSLACG00000018298 Latimeria chalumnae ENSLACG00000018298 I 0.787
ENSLACG00000004995 Latimeria chalumnae ENSLACG00000004995 I 0.764
ENSLACG00000013560 Latimeria chalumnae ENSLACG00000013560 I 0.757
ENSLOCG00000014806 Lepisosteus oculatus ENSLOCG00000014806 I 0.767
LotgiG126249 Lottia gigantea LotgiG126249 I 0.771
KLF9 Loxodonta africana ENSLAFG00000027506 I 0.764
ENSP00000366330 Macaca fascicularis ENSP00000366330 I 0.764
ENSMMUG00000000225 Macaca mulatta ENSMMUG00000000225 I 0.764
KLF13 Meleagris gallopavo ENSMGAG00000004699 I 0.820
KLF9 Microcebus murinus ENSMICG00000001056 I 0.764
KLF13 Monodelphis domestica ENSMODG00000011740 I 0.788
KLF9 Monodelphis domestica ENSMODG00000002760 I 0.764
ENSMPUG00000009506 Mustela putorius furo ENSMPUG00000009506 I 0.764
Klf13 Mus musculus ENSMUSG00000052040 I 0.808
Klf9 Mus musculus ENSMUSG00000033863 D 0.764
Myotis_brandtii_KLF9_10034438 Myotis brandtii Myotis_brandtii_KLF9_10034438 I 0.764
KLF9 Myotis lucifugus ENSMLUG00000002809 I 0.764
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I 0.759
ENSNLEG00000000826 Nomascus leucogenys ENSNLEG00000000826 I 0.764
ENSNLEG00000007555 Nomascus leucogenys ENSNLEG00000007555 I 0.804
Ogr17781 Ophisaurus gracilis Ogr17781 I 0.764
Ogr16901 Ophisaurus gracilis Ogr16901 I 0.800
ENSONIG00000015310 Oreochromis niloticus ENSONIG00000015310 I 0.767
ENSOANG00000010450 Ornithorhynchus anatinus ENSOANG00000010450 I 0.760
KLF9 Ornithorhynchus anatinus ENSOANG00000005024 I 0.764
KLF9 Oryctolagus cuniculus ENSOCUG00000006343 I 0.764
KLF13 Oryctolagus cuniculus ENSOCUG00000011101 I 0.787
klf13 Oryzias latipes ENSORLG00000007542 I 0.767
KLF9 Otolemur garnettii ENSOGAG00000030356 I 0.764
ENSOGAG00000026529 Otolemur garnettii ENSOGAG00000026529 I 0.804
ENSOARG00000012896 Ovis aries ENSOARG00000012896 I 0.764
ENSOARG00000016409 Ovis aries ENSOARG00000016409 I 0.804
KLF13 Pan troglodytes ENSPTRG00000006860 I 0.804
KLF9 Pan troglodytes ENSPTRG00000040619 I 0.764
ENSPANG00000025104 Papio anubis ENSPANG00000025104 I 0.764
PHUM248360 Pediculus humanus PHUM248360 I 0.756
ENSPSIG00000009426 Pelodiscus sinensis ENSPSIG00000009426 I 0.764
ENSPSIG00000014849 Pelodiscus sinensis ENSPSIG00000014849 I 0.804
ENSPFOG00000004556 Poecilia formosa ENSPFOG00000004556 I 0.767
Pvit_02178 Pogona vitticeps Pvit_02178 I 0.764
Pvit_17363 Pogona vitticeps Pvit_17363 I 0.800
ENSPPYG00000019284 Pongo abelii ENSPPYG00000019284 I 0.764
KLF9 Procavia capensis ENSPCAG00000003811 I 0.764
KLF13 Procavia capensis ENSPCAG00000009647 I 0.804
KLF9 Pteropus vampyrus ENSPVAG00000005970 I 0.764
Klf9 Rattus norvegicus ENSRNOG00000014215 I 0.764
ENSSHAG00000011337 Sarcophilus harrisii ENSSHAG00000011337 I 0.764
KLF13 Sus scrofa ENSSSCG00000026006 I 0.804
KLF9 Sus scrofa ENSSSCG00000021646 I 0.764
KLF11 Taeniopygia guttata ENSTGUG00000013041 I 0.767
KLF13 Taeniopygia guttata ENSTGUG00000005470 I 0.812
klf13 Takifugu rubripes ENSTRUG00000011759 I 0.766
ENSTRUG00000000453 Takifugu rubripes ENSTRUG00000000453 I 0.764
ENSTSYG00000008257 Tarsius syrichta ENSTSYG00000008257 I 0.764
tetur19g01530 Tetranychus urticae tetur19g01530 I 0.756
klf13 Tetraodon nigroviridis ENSTNIG00000008397 I 0.767
TC000837 Tribolium castaneum TC000837 I 0.771
TriadG27838 Trichoplax adhaerens TriadG27838 I 0.763
KLF11 Tupaia belangeri ENSTBEG00000008268 I 0.758
KLF9 Tupaia belangeri ENSTBEG00000007044 I 0.764
KLF9 Tursiops truncatus ENSTTRG00000001149 I 0.764
Tal_R011003 Tyto alba Tal_R011003 I 0.812
ENSXMAG00000003301 Xiphophorus maculatus ENSXMAG00000003301 I 0.767