vezf1 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-481523 T145417_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VEZF1
M01172_2.00 		Homo sapiens
CCCCCCMYNN
NNRKGGGGGG		 PBM
Lambert et al.(2019)
pTH11265 		0.824 0.989
VEZF1
M08893_2.00 		Homo sapiens
YYYYBCYYYYTCCYYYYYYYYH
DRRRRRRRRGGARRRRGVRRRR		 Misc
Kulakovskiy et al.(2013)
VEZF1_HUMAN.H11MO.0.C 		0.824 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH76974 C2H2 ZF 182 204
AAH76974 C2H2 ZF 210 232
AAH76974 C2H2 ZF 240 263
AAH76974 C2H2 ZF 269 291

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action