CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
klf9
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-483889
T145424_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf9
M00777_2.00
Mus musculus
NCCGTTAN
NTAACGGN
PBM
Weirauch et al.(2013)
pTH2353
0.811
0.986
KLF9
M08088_2.00
Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN
ChIP-seq
Mathelier et al.(2014)
MA1107.1
0.811
0.986
KLF9
M08880_2.00
Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN
Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C
0.811
0.986
Klf9
M10345_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB1_01
0.811
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI57225
C2H2 ZF
188
212
HRCPYAGCGKVYGKSSHLKAHYRVH
AAI57225
C2H2 ZF
218
242
FPCTWPDCLKKFSRSDELTRHYRTH
AAI57225
C2H2 ZF
248
270
FRCPLCEKRFMRSDHLTKHARRH
AAI70633
C2H2 ZF
188
212
HRCPYAGCGKVYGKSSHLKAHYRVH
AAI70633
C2H2 ZF
218
242
FPCTWPDCLKKFSRSDELTRHYRTH
AAI70633
C2H2 ZF
248
270
FRCPLCEKRFMRSDHLTKHARRH
AAI70637
C2H2 ZF
188
212
HRCPYAGCGKVYGKSSHLKAHYRVH
AAI70637
C2H2 ZF
218
242
FPCTWPDCLKKFSRSDELTRHYRTH
AAI70637
C2H2 ZF
248
270
FRCPLCEKRFMRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy